8ZBF image
Deposition Date 2024-04-26
Release Date 2025-04-30
Last Version Date 2025-05-07
Entry Detail
PDB ID:
8ZBF
Keywords:
DNA
Title:
Crystal structure of the A58-T10 DNA aptamer in complex with SARS-CoV-2 N-NTD
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.80 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
8ZBF validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nucleoprotein
Gene (Uniprot):N
Chain IDs:A, B, C, D
Chain Length:135
Number of Molecules:4
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC9 Pfam ID:PF00937
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (40-MER)
Chain IDs:E, F, G, H
Chain Length:40
Number of Molecules:4
Biological Source:synthetic construct
Ligand Molecules
NA
Primary Citation
Molecular characterization and broad-spectrum mechanism of coronavirus N protein aptamer
To Be Published ? ? ? (?)
Primary Citation of related structures
8ZBF
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