8Z81 image
Deposition Date 2024-04-21
Release Date 2025-02-19
Last Version Date 2025-02-19
Entry Detail
PDB ID:
8Z81
Keywords:
Title:
Photosynthetic LH2-LH1 complex from the purple bacterium Halorhodospira halophila
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Antenna complex, alpha/beta subunit
Gene (Uniprot):Hhal_1410
Chain IDs:A, E, I, M, Q, U, Y, CA (auth: 3), GA (auth: 7)
Chain Length:64
Number of Molecules:9
Biological Source:Halorhodospira halophila
Polymer Type:polypeptide(L)
Molecule:Antenna complex, alpha/beta subunit
Gene (Uniprot):Hhal_1411
Chain IDs:B, F, J, N, R, V, Z, DA (auth: 4), HA (auth: 8)
Chain Length:75
Number of Molecules:9
Biological Source:Halorhodospira halophila
Polymer Type:polypeptide(L)
Molecule:Antenna complex, alpha/beta subunit
Gene (Uniprot):Hhal_1606
Chain IDs:C, G, K, O, S, W, AA (auth: 1), EA (auth: 5), IA (auth: 9)
Chain Length:67
Number of Molecules:9
Biological Source:Halorhodospira halophila
Polymer Type:polypeptide(L)
Molecule:Antenna complex, alpha/beta subunit
Gene (Uniprot):Hhal_1607
Chain IDs:D, H, L, P, T, X, BA (auth: 2), FA (auth: 6), JA (auth: 0)
Chain Length:74
Number of Molecules:9
Biological Source:Halorhodospira halophila
Polymer Type:polypeptide(L)
Molecule:Antenna complex, alpha/beta subunit
Gene (Uniprot):Hhal_1408
Chain IDs:KA (auth: a), MA (auth: c), OA (auth: e), QA (auth: g), SA (auth: i), UA (auth: k), WA (auth: m), YA (auth: o), AB (auth: q)
Chain Length:64
Number of Molecules:9
Biological Source:Halorhodospira halophila
Polymer Type:polypeptide(L)
Molecule:Antenna complex, alpha/beta subunit
Gene (Uniprot):Hhal_1407
Chain IDs:LA (auth: b), NA (auth: d), PA (auth: f), RA (auth: h), TA (auth: j), VA (auth: l), XA (auth: n), ZA (auth: p), BB (auth: r)
Chain Length:59
Number of Molecules:9
Biological Source:Halorhodospira halophila
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CXM KA MET modified residue
Primary Citation

Abstact

Halorhodospira (Hlr.) halophila strain BN9622 is an extremely halophilic and alkaliphilic phototrophic purple sulfur bacterium isolated from a hypersaline lake in the Libyan Desert whose total salinity exceeded 35% at pH 10.7. Here we present a cryo-EM structure of the native LH1-LH2 co-complex from strain BN9622 at 2.22 Å resolution. Surprisingly, the LH1-LH2 co-complex consists of a double-ring cylindrical structure with the larger LH1 ring encircling a smaller LH2 ring. The Hlr. halophila LH1 contains 18 αβ-subunits and additional bacteriochlorophyll a (BChl a) molecules that absorb maximally at 797 nm. The LH2 ring is composed of 9 αβ-subunits, and the BChl a molecules in the co-complex form extensive intra- and inter-complex networks to allow near 100% efficiency of energy transfer to its surrounding LH1. The additional LH1-B797 BChls a are located in such a manner that they facilitate exciton transfer from monomeric BChls in LH2 to the dimeric BChls in LH1. The structural features of the strain BN9622 LH1-LH2 co-complex may have evolved to allow a minimal LH2 complex to maximize excitation transfer to the core complex and effectively harvest light in the physiologically demanding ecological niche of this purple bacterium.

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Protein

Chemical

Disease

Primary Citation of related structures