8Z6R image
Deposition Date 2024-04-19
Release Date 2025-01-29
Last Version Date 2025-07-23
Entry Detail
PDB ID:
8Z6R
Keywords:
VIRAL PROTEIN/IMMUNE SYSTEM
Title:
Structure of XBB.1.16 S trimer with 3 down-RBDs complex with antibody CYFN1006-1.
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Tequatrovirus T4 (Taxon ID: 10665)
synthetic construct (Taxon ID: 32630)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.87 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8Z6R validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein,Fibritin,Spike glycoprotein,Fibritin,Spike glycoprotein,Fibritin,Expression Tag
Gene (Uniprot):S, wac
Chain IDs:A, H (auth: B), I (auth: C)
Chain Length:1299
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus 2, Tequatrovirus T4, synthetic construct
UniProt ID:P0DTC2,P10104 Pfam ID:PF16451, PF09408, PF19209, PF01601
Polymer Type:polypeptide(L)
Molecule:CYFN1006-1 light chain
Chain IDs:B (auth: D), D (auth: F), F (auth: H)
Chain Length:215
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:CYFN1006-1 heavy chain
Chain IDs:C (auth: E), E (auth: G), G (auth: I)
Chain Length:451
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
NA
Primary Citation
Structure of XBB.1.16 S trimer with 3 down-RBDs complex with antibody CYFN1006-1.
To Be Published ? ? ? (?)
Primary Citation of related structures
8Z6R