8Z60 image
Deposition Date 2024-04-18
Release Date 2025-10-22
Last Version Date 2025-10-22
Entry Detail
PDB ID:
8Z60
Keywords:
MOTOR PROTEIN
Title:
Cryo-EM structure of the polar flagellar motor-hook complex
Biological Source:
Source Organism:
Vibrio alginolyticus (Taxon ID: 663)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.22 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8Z60 validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:LRR
Chain IDs:A (auth: 0), J (auth: 9)
Chain Length:199
Number of Molecules:2
Biological Source:Vibrio alginolyticus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar biosynthetic protein FliP
Gene (Uniprot):fliP_2
Chain IDs:B (auth: 1), C (auth: 2), D (auth: 3), LD (auth: y), MD (auth: z)
Chain Length:289
Number of Molecules:5
Biological Source:Vibrio alginolyticus
UniProt ID:A0A1W6TTE6 Pfam ID:PF00813
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar biosynthetic protein FliQ
Gene (Uniprot):fliQ
Chain IDs:E (auth: 4), F (auth: 5), G (auth: 6), H (auth: 7)
Chain Length:89
Number of Molecules:4
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0H0YAF4 Pfam ID:PF01313
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar biosynthetic protein FliR
Gene (Uniprot):fliR
Chain IDs:I (auth: 8)
Chain Length:260
Number of Molecules:1
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0H0YFV7 Pfam ID:PF01311
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar basal-body rod protein FlgG
Gene (Uniprot):flgG
Chain IDs:K (auth: A), DA (auth: AP), EA (auth: AQ), FA (auth: AR), GA (auth: AS), HA (auth: AT), IA (auth: AU), JA (auth: AV), KA (auth: AW), LA (auth: AX), MA (auth: AY), NA (auth: AZ), OA (auth: Aa), OB (auth: B), PB (auth: C), CC (auth: P), DC (auth: Q), EC (auth: R), FC (auth: S), GC (auth: T), HC (auth: U), IC (auth: V), JC (auth: W), KC (auth: X), LC (auth: Y), MC (auth: Z), NC (auth: a)
Chain Length:262
Number of Molecules:27
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0H0YB44 Pfam ID:PF00460, PF22692, PF06429
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar hook protein FlgE
Gene (Uniprot):flgE
Chain IDs:L (auth: A1), M (auth: A2), N (auth: A3), PA (auth: Ab), QA (auth: Ac), RA (auth: Ad), SA (auth: Ae), TA (auth: Af), UA (auth: Ag), VA (auth: Ah), WA (auth: Ai), XA (auth: Aj), YA (auth: Ak), ZA (auth: Al), AB (auth: Am), BB (auth: An), CB (auth: Ao), DB (auth: Ap), EB (auth: Aq), FB (auth: Ar), GB (auth: As), HB (auth: At), IB (auth: Au), JB (auth: Av), KB (auth: Aw), LB (auth: Ax), MB (auth: Ay), NB (auth: Az), QB (auth: D), RB (auth: E), SB (auth: F), TB (auth: G), UB (auth: H), VB (auth: I), WB (auth: J), XB (auth: K), YB (auth: L), ZB (auth: M), AC (auth: N), BC (auth: O)
Chain Length:437
Number of Molecules:40
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0H0YA78 Pfam ID:PF00460, PF22692, PF07559, PF06429
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar M-ring protein
Gene (Uniprot):fliF
Chain IDs:O (auth: AA), P (auth: AB), Q (auth: AC), R (auth: AD), S (auth: AE), T (auth: AF), U (auth: AG), V (auth: AH), W (auth: AI), X (auth: AJ), Y (auth: AK), Z (auth: AL), AA (auth: AM), BA (auth: AN), CA (auth: AO), NK (auth: Dz), OK (auth: D1), PK (auth: D2), QK (auth: D3), RK (auth: D4), SK (auth: D5), EL (auth: EG), FL (auth: EH), GL (auth: EI), HL (auth: EJ), IL (auth: EK), JL (auth: EL), KL (auth: EM), LL (auth: EN), ML (auth: EO), NL (auth: EP), OL (auth: EQ), PL (auth: ER), QL (auth: ES), RL (auth: ET), SL (auth: EU), TL (auth: EV), UL (auth: EW), VL (auth: EX), WL (auth: EY), XL (auth: EZ), YL (auth: Ea), ZL (auth: Eb), AM (auth: Ec), BM (auth: Ed), CM (auth: Ee), DM (auth: Ef), EM (auth: Eg), FM (auth: Eh), GM (auth: Ei), HM (auth: Ej), IM (auth: Ek), JM (auth: El), KM (auth: Em), LM (auth: En), MM (auth: Eo), NM (auth: Ep), OM (auth: Eq), PM (auth: Er), QM (auth: Es), RM (auth: Et), SM (auth: Eu), TM (auth: Ev), UM (auth: Ew), VM (auth: Ex), WM (auth: Ey), XM (auth: Ez), YM (auth: E1), ZM (auth: E2), AN (auth: E3), BN (auth: E4), CN (auth: E5)
Chain Length:262
Number of Molecules:72
Biological Source:Vibrio alginolyticus
UniProt ID:Q75N27 Pfam ID:PF01514, PF08345
Polymer Type:polypeptide(L)
Molecule:FlgH
Chain IDs:QD (auth: B0), VD (auth: CE), ZD (auth: CH), EE (auth: A6), KE (auth: CM), PE (auth: CR), UE (auth: CW), ZE (auth: Cb), EF (auth: Cg), JF (auth: Cl), OF (auth: Cq), TF (auth: Cv), YF (auth: C1), DG (auth: C6), MG (auth: B4), PG (auth: BA), UG (auth: BF), ZG (auth: BK), EH (auth: BP), JH (auth: BU), OH (auth: BZ), TH (auth: Be), YH (auth: Bj), DI (auth: Bo), II (auth: Bt), NI (auth: By), XK (auth: D0)
Chain Length:13
Number of Molecules:27
Biological Source:Vibrio alginolyticus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagella basal-body protein
Gene (Uniprot):flgT
Chain IDs:ND (auth: B7), SD (auth: CB), BE (auth: CJ), GE (auth: A8), ME (auth: CO), RE (auth: CT), WE (auth: CY), BF (auth: Cd), GF (auth: Ci), LF (auth: Cn), QF (auth: Cs), VF (auth: Cx), AG (auth: C3), FG (auth: C8), JG (auth: B1), OG (auth: B6), RG (auth: BC), WG (auth: BH), BH (auth: BM), GH (auth: BR), LH (auth: BW), QH (auth: Bb), VH (auth: Bg), AI (auth: Bl), FI (auth: Bq), KI (auth: Bv)
Chain Length:377
Number of Molecules:26
Biological Source:Vibrio alginolyticus
UniProt ID:D9N551 Pfam ID:PF16548, PF16539, PF16538
Polymer Type:polypeptide(L)
Molecule:FlgH
Chain IDs:OD (auth: B8), TD (auth: CC), CE (auth: A4), HE (auth: A9), IE (auth: CK), NE (auth: CP), SE (auth: CU), XE (auth: CZ), CF (auth: Ce), HF (auth: Cj), MF (auth: Co), RF (auth: Ct), WF (auth: Cy), BG (auth: C4), GG (auth: C9), KG (auth: B2), SG (auth: BD), XG (auth: BI), CH (auth: BN), HH (auth: BS), MH (auth: BX), RH (auth: Bc), WH (auth: Bh), BI (auth: Bm), GI (auth: Br), LI (auth: Bw)
Chain Length:259
Number of Molecules:26
Biological Source:Vibrio alginolyticus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar assembly lipoprotein FlgP
Gene (Uniprot):flgP
Chain IDs:PD (auth: B9), UD (auth: CD), YD (auth: A0), DE (auth: A5), JE (auth: CL), OE (auth: CQ), TE (auth: CV), YE (auth: Ca), DF (auth: Cf), IF (auth: Ck), NF (auth: Cp), SF (auth: Cu), XF (auth: Cz), CG (auth: C5), HG (auth: C0), LG (auth: B3), TG (auth: BE), YG (auth: BJ), DH (auth: BO), IH (auth: BT), NH (auth: BY), SH (auth: Bd), XH (auth: Bi), CI (auth: Bn), HI (auth: Bs), MI (auth: Bx)
Chain Length:143
Number of Molecules:26
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0H0Y943
Polymer Type:polypeptide(L)
Molecule:FlgI
Chain IDs:RD (auth: CA), WD (auth: CF), AE (auth: CI), FE (auth: A7), LE (auth: CN), QE (auth: CS), VE (auth: CX), AF (auth: Cc), FF (auth: Ch), KF (auth: Cm), PF (auth: Cr), UF (auth: Cw), ZF (auth: C2), EG (auth: C7), NG (auth: B5), QG (auth: BB), VG (auth: BG), AH (auth: BL), FH (auth: BQ), KH (auth: BV), PH (auth: Ba), UH (auth: Bf), ZH (auth: Bk), EI (auth: Bp), JI (auth: Bu), OI (auth: Bz)
Chain Length:363
Number of Molecules:26
Biological Source:Vibrio alginolyticus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Component of sodium-driven polar flagellar motor
Gene (Uniprot):MotY
Chain IDs:XD (auth: CG), IG (auth: DA), RI (auth: DD), SI (auth: DE), VI (auth: DH), WI (auth: DI), ZI (auth: DL), AJ (auth: DM), DJ (auth: DP), EJ (auth: DQ), HJ (auth: DT), IJ (auth: DU), LJ (auth: DX), MJ (auth: DY), PJ (auth: Db), QJ (auth: Dc), TJ (auth: Df), UJ (auth: Dg), XJ (auth: Dj), YJ (auth: Dk), BK (auth: Dn), CK (auth: Do), FK (auth: Dr), GK (auth: Ds), JK (auth: Dv), KK (auth: Dw)
Chain Length:13
Number of Molecules:26
Biological Source:Vibrio alginolyticus
UniProt ID:P74944 Pfam ID:PF18393, PF00691
Polymer Type:polypeptide(L)
Molecule:FlgB-Dc
Chain IDs:TK (auth: D6), UK (auth: D7), VK (auth: D8), WK (auth: D9)
Chain Length:13
Number of Molecules:4
Biological Source:Vibrio alginolyticus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sodium-type flagellar motor component
Gene (Uniprot):motX
Chain IDs:PI (auth: DB), QI (auth: DC), TI (auth: DF), UI (auth: DG), XI (auth: DJ), YI (auth: DK), BJ (auth: DN), CJ (auth: DO), FJ (auth: DR), GJ (auth: DS), JJ (auth: DV), KJ (auth: DW), NJ (auth: DZ), OJ (auth: Da), RJ (auth: Dd), SJ (auth: De), VJ (auth: Dh), WJ (auth: Di), ZJ (auth: Dl), AK (auth: Dm), DK (auth: Dp), EK (auth: Dq), HK (auth: Dt), IK (auth: Du), LK (auth: Dx), MK (auth: Dy)
Chain Length:293
Number of Molecules:26
Biological Source:Vibrio alginolyticus
UniProt ID:Q93R25 Pfam ID:PF08238
Polymer Type:polypeptide(L)
Molecule:FliE-helix 1
Chain IDs:YK (auth: EA), ZK (auth: EB), AL (auth: EC), BL (auth: ED), CL (auth: EE), DL (auth: EF)
Chain Length:17
Number of Molecules:6
Biological Source:Vibrio alginolyticus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar basal body rod protein FlgB
Gene (Uniprot):flgB
Chain IDs:OC (auth: b), PC (auth: c), QC (auth: d), RC (auth: e), SC (auth: f)
Chain Length:131
Number of Molecules:5
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0G9LZG6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar basal-body rod protein FlgC
Gene (Uniprot):flgC
Chain IDs:TC (auth: g), UC (auth: h), VC (auth: i), WC (auth: j), XC (auth: k), YC (auth: l)
Chain Length:137
Number of Molecules:6
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0G9LZH2 Pfam ID:PF00460, PF06429
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar basal-body rod protein FlgF
Gene (Uniprot):flgF
Chain IDs:ZC (auth: m), AD (auth: n), BD (auth: o), CD (auth: p), DD (auth: q)
Chain Length:437
Number of Molecules:5
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0G9M4M9 Pfam ID:PF00460, PF22692, PF06429
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar hook-basal body complex protein FliE
Gene (Uniprot):fliE
Chain IDs:ED (auth: r), FD (auth: s), GD (auth: t), HD (auth: u), ID (auth: v), JD (auth: w)
Chain Length:262
Number of Molecules:6
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0H0Y9C1 Pfam ID:PF02049
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar biosynthetic protein FlhB
Gene (Uniprot):flhB
Chain IDs:KD (auth: x)
Chain Length:262
Number of Molecules:1
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0H0YB55 Pfam ID:PF01312
Ligand Molecules
NA
Primary Citation
Cryo-EM structure of the polar flagellar motor-hook complex
To be published ? ? ? (?)
Primary Citation of related structures
8Z60
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