ISDA: 8Z5U

Deposition Date 2024-04-18

Release Date 2025-10-22

Last Version Date 2025-10-22

Entry Detail

PDB ID:

8Z5U

Keywords:

MOTOR PROTEIN

Title:

Cryo-EM structure of the rod-export apparatus with partial hook within the polar flagellar motor

Biological Source:

Source Organism:

Vibrio alginolyticus (Taxon ID: 663)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.04 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:Leucine-rich repeat protein
Chain IDs:M (auth: 0), V (auth: 9)
Chain Length:199
Number of Molecules:2
Biological Source:Vibrio alginolyticus

Polymer Type:polypeptide(L)
Molecule:Flagellar biosynthetic protein FliP
Chain IDs:N (auth: 1), O (auth: 2), P (auth: 3), JC (auth: y), KC (auth: z)
Chain Length:289
Number of Molecules:5
Biological Source:Vibrio alginolyticus

Polymer Type:polypeptide(L)
Molecule:Flagellar biosynthetic protein FliQ
Chain IDs:Q (auth: 4), R (auth: 5), S (auth: 6), T (auth: 7)
Chain Length:89
Number of Molecules:4
Biological Source:Vibrio alginolyticus

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Flagellar biosynthetic protein FliR
Gene (Uniprot):fliR
Chain IDs:U (auth: 8)
Chain Length:260
Number of Molecules:1
Biological Source:Vibrio alginolyticus

UniProt ID:A0A0H0YFV7 Pfam ID:PF01311

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Flagellar basal-body rod protein FlgG
Gene (Uniprot):flgG
Chain IDs:W (auth: A), MA (auth: B), NA (auth: C), OA (auth: AP), PA (auth: AQ), QA (auth: AR), RA (auth: AS), SA (auth: AT), TA (auth: AU), UA (auth: AV), VA (auth: AW), WA (auth: AX), XA (auth: AY), YA (auth: AZ), ZA (auth: Aa), AB (auth: P), BB (auth: Q), CB (auth: R), DB (auth: S), EB (auth: T), FB (auth: U), GB (auth: V), HB (auth: W), IB (auth: X), JB (auth: Y), KB (auth: Z), LB (auth: a)
Chain Length:262
Number of Molecules:27
Biological Source:Vibrio alginolyticus

UniProt ID:A0A0H0YB44 Pfam ID:PF00460, PF22692, PF06429

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Flagellar M-ring protein
Gene (Uniprot):fliF
Chain IDs:X (auth: AA), Y (auth: AB), Z (auth: AC), AA (auth: AD), BA (auth: AE), CA (auth: AF), DA (auth: AG), EA (auth: AH), FA (auth: AI), GA (auth: AJ), HA (auth: AK), IA (auth: AL), JA (auth: AM), KA (auth: AN), LA (auth: AO)
Chain Length:580
Number of Molecules:15
Biological Source:Vibrio alginolyticus

UniProt ID:Q75N27 Pfam ID:PF01514, PF08345

Polymer Type:polypeptide(L)
Molecule:Flagellar hook protein FlgE
Chain IDs:A (auth: D), B (auth: E), C (auth: F), D (auth: G), E (auth: H), F (auth: I), G (auth: J), H (auth: K), I (auth: L), J (auth: M), K (auth: N), L (auth: O)
Chain Length:437
Number of Molecules:12
Biological Source:Vibrio alginolyticus

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Flagellar basal body rod protein FlgB
Gene (Uniprot):flgB
Chain IDs:MB (auth: b), NB (auth: c), OB (auth: d), PB (auth: e), QB (auth: f)
Chain Length:262
Number of Molecules:5
Biological Source:Vibrio alginolyticus

UniProt ID:A0A0G9LZG6

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Flagellar basal-body rod protein FlgC
Gene (Uniprot):flgC
Chain IDs:RB (auth: g), SB (auth: h), TB (auth: i), UB (auth: j), VB (auth: k), WB (auth: l)
Chain Length:437
Number of Molecules:6
Biological Source:Vibrio alginolyticus

UniProt ID:A0A0G9LZH2 Pfam ID:PF00460, PF06429

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Flagellar basal-body rod protein FlgF
Gene (Uniprot):flgF
Chain IDs:XB (auth: m), YB (auth: n), ZB (auth: o), AC (auth: p), BC (auth: q)
Chain Length:437
Number of Molecules:5
Biological Source:Vibrio alginolyticus

UniProt ID:A0A0G9M4M9 Pfam ID:PF00460, PF22692, PF06429

Polymer Type:polypeptide(L)
Molecule:Flagellar hook-basal body complex protein FliE
Chain IDs:CC (auth: r), DC (auth: s), EC (auth: t), FC (auth: u), GC (auth: v), HC (auth: w)
Chain Length:262
Number of Molecules:6
Biological Source:Vibrio alginolyticus

Polymer Type:polypeptide(L)
Molecule:Flagellar biosynthetic protein FlhB
Chain IDs:IC (auth: x)
Chain Length:262
Number of Molecules:1
Biological Source:Vibrio alginolyticus

Ligand Molecules

Primary Citation

Cryo-EM structure of the rod-export apparatus with partial hook within the polar flagellar motor

Zhang, L, Tan, J.X, Zhou, Y, Zhu, Y.Q.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

Feedback Form