8Z5N image
Deposition Date 2024-04-18
Release Date 2025-10-22
Last Version Date 2025-10-22
Entry Detail
PDB ID:
8Z5N
Keywords:
MOTOR PROTEIN
Title:
Cryo-EM structure of the LPHT ring
Biological Source:
Source Organism:
Vibrio alginolyticus (Taxon ID: 663)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.95 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8Z5N validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Flagellar L-ring protein
Chain IDs:AB (auth: 1), FB (auth: 6), KB (auth: AA), PB (auth: AF), UB (auth: AK), ZB (auth: AP), EC (auth: AU), JC (auth: AZ), OC (auth: Ae), TC (auth: Aj), YC (auth: Ao), DD (auth: At), ID (auth: Ay), ND (auth: A4), SD (auth: A9), XD (auth: BD), CE (auth: BI), HE (auth: BN), ME (auth: BS), RE (auth: BX), WE (auth: Bc), BF (auth: Bh), GF (auth: Bm), LF (auth: Br), QF (auth: Bw), VF (auth: B2)
Chain Length:259
Number of Molecules:26
Biological Source:Vibrio alginolyticus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar assembly lipoprotein FlgP
Gene (Uniprot):flgP
Chain IDs:BB (auth: 2), GB (auth: 7), LB (auth: AB), QB (auth: AG), VB (auth: AL), AC (auth: AQ), FC (auth: AV), KC (auth: Aa), PC (auth: Af), UC (auth: Ak), ZC (auth: Ap), ED (auth: Au), JD (auth: Az), OD (auth: A5), TD (auth: A0), YD (auth: BE), DE (auth: BJ), IE (auth: BO), NE (auth: BT), SE (auth: BY), XE (auth: Bd), CF (auth: Bi), HF (auth: Bn), MF (auth: Bs), RF (auth: Bx), WF (auth: B3)
Chain Length:143
Number of Molecules:26
Biological Source:Vibrio alginolyticus
UniProt ID:A0A0H0Y943
Polymer Type:polypeptide(L)
Molecule:The N-terminus of Flagellar L-ring protein
Chain IDs:CB (auth: 3), HB (auth: 8), MB (auth: AC), RB (auth: AH), WB (auth: AM), BC (auth: AR), GC (auth: AW), LC (auth: Ab), QC (auth: Ag), VC (auth: Al), AD (auth: Aq), FD (auth: Av), KD (auth: A1), PD (auth: A6), UD (auth: BA), ZD (auth: BF), EE (auth: BK), JE (auth: BP), OE (auth: BU), TE (auth: BZ), YE (auth: Be), DF (auth: Bj), IF (auth: Bo), NF (auth: Bt), SF (auth: By), XF (auth: B4)
Chain Length:13
Number of Molecules:26
Biological Source:Vibrio alginolyticus
Polymer Type:polypeptide(L)
Molecule:Flagellar P-ring protein
Chain IDs:DB (auth: 4), IB (auth: 9), NB (auth: AD), SB (auth: AI), XB (auth: AN), CC (auth: AS), HC (auth: AX), MC (auth: Ac), RC (auth: Ah), WC (auth: Am), BD (auth: Ar), GD (auth: Aw), LD (auth: A2), QD (auth: A7), VD (auth: BB), AE (auth: BG), FE (auth: BL), KE (auth: BQ), PE (auth: BV), UE (auth: Ba), ZE (auth: Bf), EF (auth: Bk), JF (auth: Bp), OF (auth: Bu), TF (auth: Bz), YF (auth: B5)
Chain Length:363
Number of Molecules:26
Biological Source:Vibrio alginolyticus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagella basal-body protein
Gene (Uniprot):flgT
Chain IDs:EB (auth: 5), JB (auth: 0), OB (auth: AE), TB (auth: AJ), YB (auth: AO), DC (auth: AT), IC (auth: AY), NC (auth: Ad), SC (auth: Ai), XC (auth: An), CD (auth: As), HD (auth: Ax), MD (auth: A3), RD (auth: A8), WD (auth: BC), BE (auth: BH), GE (auth: BM), LE (auth: BR), QE (auth: BW), VE (auth: Bb), AF (auth: Bg), FF (auth: Bl), KF (auth: Bq), PF (auth: Bv), UF (auth: B1), ZF (auth: B6)
Chain Length:377
Number of Molecules:26
Biological Source:Vibrio alginolyticus
UniProt ID:D9N551 Pfam ID:PF16548, PF16539, PF16538
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Component of sodium-driven polar flagellar motor
Gene (Uniprot):MotY
Chain IDs:A, B, E, F, I, J, M, N, Q, R, U, V, Y, Z, CA (auth: c), DA (auth: d), GA (auth: g), HA (auth: h), KA (auth: k), LA (auth: l), OA (auth: o), PA (auth: p), SA (auth: s), TA (auth: t), WA (auth: w), XA (auth: x)
Chain Length:211
Number of Molecules:26
Biological Source:Vibrio alginolyticus
UniProt ID:P74944 Pfam ID:PF18393, PF00691
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sodium-type flagellar motor component
Gene (Uniprot):motX
Chain IDs:C, D, G, H, K, L, O, P, S, T, W, X, AA (auth: a), BA (auth: b), EA (auth: e), FA (auth: f), IA (auth: i), JA (auth: j), MA (auth: m), NA (auth: n), QA (auth: q), RA (auth: r), UA (auth: u), VA (auth: v), YA (auth: y), ZA (auth: z)
Chain Length:211
Number of Molecules:26
Biological Source:Vibrio alginolyticus
UniProt ID:Q93R25 Pfam ID:PF08238
Ligand Molecules
NA
Primary Citation
Cryo-EM structure of the LPHT ring
To Be Published ? ? ? (?)
Primary Citation of related structures
8Z5N
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