8Z2E image
Deposition Date 2024-04-12
Release Date 2025-04-23
Last Version Date 2025-04-23
Entry Detail
PDB ID:
8Z2E
Keywords:
VIRAL PROTEIN/IMMUNE SYSTEM
Title:
Crystal structure of nanobody Tnb04-1 with antibody 1F11 fab and SARS-CoV-2 RBD
Biological Source:
Source Organism:
Vicugna pacos (Taxon ID: 30538)
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.30 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
8Z2E validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tnb04-1
Chain IDs:A (auth: B)
Chain Length:116
Number of Molecules:1
Biological Source:Vicugna pacos
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike protein S1
Gene (Uniprot):S
Chain IDs:B (auth: E)
Chain Length:217
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2 Pfam ID:PF09408
Polymer Type:polypeptide(L)
Molecule:1F11-H
Chain IDs:C (auth: H)
Chain Length:217
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:1F11-L
Chain IDs:D (auth: L)
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Crystal structure of nanobody Tnb04-1 with antibody 1F11 fab and SARS-CoV-2 RBD
To Be Published ? ? ? (?)
Primary Citation of related structures
8Z2E