ISDA: 8Z1Z

Deposition Date 2024-04-12

Release Date 2025-04-16

Last Version Date 2025-04-16

Entry Detail

PDB ID:

8Z1Z

Keywords:

TRANSPORT PROTEIN

Title:

Cryo-EM structure of Escherichia coli DppAR383D+D436RBCDF in pre-catalytic state

Biological Source:

Source Organism(s):

Escherichia coli K-12 (Taxon ID: 83333)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.26 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Dipeptide transport system permease protein DppB
Gene (Uniprot):dppB
Chain IDs:A
Chain Length:339
Number of Molecules:1
Biological Source:Escherichia coli K-12

UniProt ID:P0AEF8 Pfam ID:PF19300, PF00528

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Dipeptide transport system permease protein DppC
Gene (Uniprot):dppC
Chain IDs:B
Chain Length:300
Number of Molecules:1
Biological Source:Escherichia coli K-12

UniProt ID:P0AEG1 Pfam ID:PF12911, PF00528

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Dipeptide transport ATP-binding protein DppD
Gene (Uniprot):dppD
Chain IDs:C
Chain Length:327
Number of Molecules:1
Biological Source:Escherichia coli K-12

UniProt ID:P0AAG0 Pfam ID:PF00005, PF08352

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Dipeptide transport ATP-binding protein DppF
Gene (Uniprot):dppF
Chain IDs:D
Chain Length:334
Number of Molecules:1
Biological Source:Escherichia coli (strain K12)

UniProt ID:P37313 Pfam ID:PF00005, PF08352

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Dipeptide-binding protein
Gene (Uniprot):dppA
Mutagens:R383D, D436R
Chain IDs:E (auth: F)
Chain Length:535
Number of Molecules:1
Biological Source:Escherichia coli K-12

UniProt ID:P23847 Pfam ID:PF00496

Ligand Molecules