8YZI image
Deposition Date 2024-04-07
Release Date 2024-12-11
Last Version Date 2025-06-25
Entry Detail
PDB ID:
8YZI
Keywords:
Title:
The structure of PDCoV RBD and dog APN complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.05 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Aminopeptidase N
Gene (Uniprot):ANPEP
Chain IDs:C (auth: B), D
Chain Length:940
Number of Molecules:2
Biological Source:Canis lupus familiaris
Polymer Type:polypeptide(L)
Molecule:Spike protein
Chain IDs:A (auth: C), B (auth: A)
Chain Length:132
Number of Molecules:2
Biological Source:Porcine deltacoronavirus
Primary Citation
Cross-species recognition of two porcine coronaviruses to their cellular receptor aminopeptidase N of dogs and seven other species.
Plos Pathog. 21 e1012836 e1012836 (2025)
PMID: 39774464 DOI: 10.1371/journal.ppat.1012836

Abstact

Porcine deltacoronavirus (PDCoV) and transmissible gastroenteritis coronavirus (TGEV), the two causative agents of porcine diarrhea, have been reported to be at risk of cross-species transmission, including to humans. However, the potential host range in which these two CoVs interact remains unclear. We screened 16 animal counterparts for porcine aminopeptidase N (APN), the receptor of PDCoV and TGEV, and found that APNs from eight of 17 animals could bind to the receptor-binding domains (RBDs) of PDCoV and TGEV. Furthermore, the animal APNs that could bind to the RBDs could mediate cellular infection by both viruses. Dog APN (dAPN) has been identified as the animal receptor with the highest capability to mediate the virus infection. We further resolved the complex structures of dAPN bound to the PDCoV RBD/TGEV RBD, respectively, establishing its divergent receptor-binding modes. We identified R325 of dAPN as an important residue in the PDCoV RBD-dAPN interaction, and found the central role of Q746 and T749 in dAPN in the interaction with the TGEV RBD. These findings provide the molecular basis of the potential cross-species transmission of these two porcine CoVs and shed light on future surveillance of these CoVs.

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