8YYZ image
Deposition Date 2024-04-04
Release Date 2025-04-09
Last Version Date 2025-04-09
Entry Detail
PDB ID:
8YYZ
Keywords:
IMMUNE SYSTEM
Title:
Crystal structure of Sonic hedgehog in complex with antibody 5E1 mutant H-R102A in the absence of metals
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.90 Å
R-Value Free:
0.22
R-Value Work:
0.18
Space Group:
P 21 21 21
8YYZ validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sonic hedgehog protein N-product
Gene (Uniprot):SHH
Chain IDs:A
Chain Length:169
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q15465 Pfam ID:PF01085
Polymer Type:polypeptide(L)
Molecule:Heavy chain antibody 5E1 mutated
Mutagens:R102A
Chain IDs:B (auth: H)
Chain Length:241
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Light chain antibody 5E1
Chain IDs:C (auth: L)
Chain Length:235
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
CL
GOL
IOD
Primary Citation
Biophysical insights to improve affinity of antibodies to fluctuated epitope of antigen: A case of anti-Shh antibody 5E1 against Shh antigen.
To Be Published ? ? ? (?)
Primary Citation of related structures
8YYZ