ISDA

Entry Detail

PDB ID:

8YYW

EMDB ID:

EMD-39681

Keywords:

MEMBRANE PROTEIN

Title:

Cryo-EM structure of OXGR1 bound to alpha-ketoglutarate and Gq proteins

Biological Source:

Source Organism:

Vicugna pacos, Homo sapiens

Host Organism:

Spodoptera frugiperda

PDB Version:

Deposition Date:

2024-04-04

Release Date:

2025-04-09

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.16 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Description:ScFv16
Chain IDs:A (auth: B)
Chain Length:247
Number of Molecules:1
Biological Source:Vicugna pacos

Protein Blast

Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Chain IDs:B (auth: C)
Chain Length:339
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62873 Pfam ID:PF00400

Protein Blast

Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Chain IDs:C (auth: D)
Chain Length:57
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P59768 Pfam ID:PF00631

Protein Blast

Polymer Type:polypeptide(L)
Description:2-oxoglutarate receptor 1
Chain IDs:D (auth: E)
Chain Length:337
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q96P68 Pfam ID:PF00001

Protein Blast

Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(q) subunit alpha
Mutations:G203A, A326S
Chain IDs:E (auth: F)
Chain Length:354
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P50148

Ligand Molecules

AKG

Primary Citation

Cryo-EM structure of OXGR1 bound to alpha-ketoglutarate

Liu, A, Liu, Y.Show

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Primary Citation of related structures