ISDA

Entry Detail

PDB ID:

8YYM

EMDB ID:

EMD-39676

Keywords:

IMMUNE SYSTEM

Title:

Cryo-EM structure of cylindrical fiber of MyD88 TIR

Biological Source:

Source Organism:

Homo sapiens

Host Organism:

Escherichia coli BL21(DE3)

PDB Version:

Deposition Date:

2024-04-04

Release Date:

2025-03-26

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.30 Å

Aggregation State:

HELICAL ARRAY

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Myeloid differentiation primary response protein MyD88
Chain IDs:A, B (auth: AA), C (auth: AB), D (auth: AC), E (auth: B), F (auth: BA), G (auth: BB), H (auth: BC), I (auth: C), J (auth: CA), K (auth: CB), L (auth: CC), M (auth: D), N (auth: DA), O (auth: DB), P (auth: DC), Q (auth: E), R (auth: EA), S (auth: EB), T (auth: EC), U (auth: F), V (auth: FA), W (auth: FB), X (auth: FC), Y (auth: G), Z (auth: GA), AA (auth: GB), BA (auth: GC), CA (auth: H), DA (auth: HA), EA (auth: HB), FA (auth: HC), GA (auth: I), HA (auth: IA), IA (auth: IB), JA (auth: IC), KA (auth: J), LA (auth: JA), MA (auth: JB), NA (auth: JC), OA (auth: K), PA (auth: KA), QA (auth: KB), RA (auth: KC), SA (auth: L), TA (auth: LA), UA (auth: LB), VA (auth: LC), WA (auth: M), XA (auth: MA), YA (auth: MB), ZA (auth: MC), AB (auth: N), BB (auth: NA), CB (auth: NB), DB (auth: NC), EB (auth: O), FB (auth: OA), GB (auth: OB), HB (auth: OC), IB (auth: P), JB (auth: PA), KB (auth: PB), LB (auth: PC), MB (auth: Q), NB (auth: QA), OB (auth: QB), PB (auth: QC), QB (auth: R), RB (auth: RA), SB (auth: RB), TB (auth: RC), UB (auth: S), VB (auth: SA), WB (auth: SB), XB (auth: SC), YB (auth: T), ZB (auth: TA), AC (auth: TB), BC (auth: TC), CC (auth: U), DC (auth: UA), EC (auth: UB), FC (auth: UC), GC (auth: V), HC (auth: VA), IC (auth: VB), JC (auth: VC), KC (auth: W), LC (auth: WA), MC (auth: WB), NC (auth: WC), OC (auth: X), PC (auth: XA), QC (auth: XB), RC (auth: XC), SC (auth: Y), TC (auth: YA), UC (auth: YB), VC (auth: YC), WC (auth: Z), XC (auth: ZA), YC (auth: ZB), ZC
Chain Length:144
Number of Molecules:104
Biological Source:Homo sapiens

UniProt ID:Q99836 Pfam ID:PF13676

Ligand Molecules

Primary Citation

From Monomers to Oligomers: Structural Mechanism of Receptor-Triggered MyD88 Assembly in Innate Immune Signaling

Kasai, K, Imamura, K, Uno, M, Sekiyama, N, Miyata, T, Makino, F, Yamada, R, Takahashi, Y, Kodera, N, Namba, K, Ohnishi, H, Narita, A, Konno, H, Tochio, H.Show

Biorxiv ? ? ? (2024)

DOI: 10.1101/2024.09.13.612588

Primary Citation of related structures