8YW1 image
Deposition Date 2024-03-29
Release Date 2024-12-11
Last Version Date 2024-12-11
Entry Detail
PDB ID:
8YW1
Keywords:
VIRAL PROTEIN
Title:
Semliki Forest virus viron in complex with VLDLR
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Semliki Forest virus 4 (Taxon ID: 1642950)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.44 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8YW1 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein E1
Chain IDs:A, E (auth: F), F (auth: G), G (auth: H), R (auth: E), U, V, W
Chain Length:52
Number of Molecules:8
Biological Source:Semliki Forest virus 4
UniProt ID:P03315 Pfam ID:PF01589, PF00943, PF00944, PF01563
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein E2
Chain IDs:B, H (auth: I), I (auth: J), J (auth: K), S (auth: R), X, Y, Z
Chain Length:52
Number of Molecules:8
Biological Source:Semliki Forest virus 4
UniProt ID:P03315 Pfam ID:PF01589, PF00943, PF00944, PF01563
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Very low-density lipoprotein receptor
Gene (Uniprot):VLDLR
Chain IDs:C
Chain Length:121
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P98155 Pfam ID:PF00057
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:capsid protein, partial
Chain IDs:D, N (auth: O), O (auth: P), P (auth: Q), T, DA (auth: d), EA (auth: e), FA (auth: f)
Chain Length:161
Number of Molecules:8
Biological Source:Semliki Forest virus 4
UniProt ID:P03315 Pfam ID:PF01589, PF00943, PF00944, PF01563
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein E3
Chain IDs:K (auth: L), L (auth: M), M (auth: N), Q (auth: S), AA (auth: a), BA (auth: b), CA (auth: c), GA (auth: g)
Chain Length:52
Number of Molecules:8
Biological Source:Semliki Forest virus 4
UniProt ID:P03315 Pfam ID:PF01589, PF00943, PF00944, PF01563
Ligand Molecules
NA
Primary Citation
Structure of Semliki Forest virus at 3.02 Angstroms resolution
To Be Published ? ? ? (?)
Primary Citation of related structures
8YW1