ISDA: 8YS6

Deposition Date 2024-03-22

Release Date 2025-07-02

Last Version Date 2025-11-19

Entry Detail

PDB ID:

8YS6

Keywords:

OXIDOREDUCTASE

Title:

Helicobacter pylori OorDABC in complex with Napabucasin

Biological Source:

Source Organism:

Helicobacter pylori (Taxon ID: 210)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.03 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:2-oxoglutarate synthase subunit alpha
Chain IDs:B (auth: A), F (auth: G)
Chain Length:375
Number of Molecules:2
Biological Source:Helicobacter pylori

Polymer Type:polypeptide(L)
Molecule:2-oxoglutarate:acceptor oxidoreductase
Chain IDs:D (auth: B), H (auth: I)
Chain Length:186
Number of Molecules:2
Biological Source:Helicobacter pylori

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:2-oxoglutarate ferredoxin oxidoreductase subunit beta
Gene (Uniprot):korB
Chain IDs:C, G (auth: H)
Chain Length:273
Number of Molecules:2
Biological Source:Helicobacter pylori

UniProt ID:A0A024BZG2 Pfam ID:PF02775

Polymer Type:polypeptide(L)
Molecule:2-oxoglutarate:acceptor oxidoreductase
Chain IDs:A (auth: D), E (auth: F)
Chain Length:113
Number of Molecules:2
Biological Source:Helicobacter pylori

Ligand Molecules