8YS5 image
Deposition Date 2024-03-22
Release Date 2025-07-02
Last Version Date 2025-07-02
Entry Detail
PDB ID:
8YS5
Keywords:
OXIDOREDUCTASE
Title:
Cryo-EM structure of the Helicobacter pylori OorDABC complex in the apo-form
Biological Source:
Source Organism:
Helicobacter pylori (Taxon ID: 210)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.95 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8YS5 validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:2-oxoglutarate synthase subunit alpha
Chain IDs:B (auth: A), F (auth: G)
Chain Length:375
Number of Molecules:2
Biological Source:Helicobacter pylori
Polymer Type:polypeptide(L)
Molecule:2-oxoglutarate:acceptor oxidoreductase
Chain IDs:D (auth: B), H (auth: I)
Chain Length:186
Number of Molecules:2
Biological Source:Helicobacter pylori
Protein Blast
Polymer Type:polypeptide(L)
Molecule:2-oxoglutarate ferredoxin oxidoreductase subunit beta
Gene (Uniprot):korB
Chain IDs:C, G (auth: H)
Chain Length:273
Number of Molecules:2
Biological Source:Helicobacter pylori
UniProt ID:A0A024BZG2 Pfam ID:PF02775
Polymer Type:polypeptide(L)
Molecule:2-oxoglutarate:acceptor oxidoreductase
Chain IDs:A (auth: D), E (auth: F)
Chain Length:113
Number of Molecules:2
Biological Source:Helicobacter pylori
Ligand Molecules
MG
SF4
TPP
Primary Citation
Cryo-EM structure of the Helicobacter pylori OorDABC complex in the apo-form
To Be Published ? ? ? (?)
Primary Citation of related structures
8YS5