ISDA

Entry Detail

PDB ID:

8YQQ

EMDB ID:

EMD-39502

Keywords:

VIRAL PROTEIN/HYDROLASE

Title:

Structure of HKU1B RBD with TMPRSS2

Biological Source:

Source Organism:

Candidatus Accumulibacter adiacens, Homo sapiens

Host Organism:

Baculovirus expression vector pFastBac1-HM

PDB Version:

Deposition Date:

2024-03-19

Release Date:

2024-08-28

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.95 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Spike protein S1
Chain IDs:A
Chain Length:285
Number of Molecules:1
Biological Source:Candidatus Accumulibacter adiacens

UniProt ID:Q0ZME7 Pfam ID:PF09408 EC:3.4.21.B60

Protein Blast

Polymer Type:polypeptide(L)
Description:Transmembrane protease serine 2
Chain IDs:B
Chain Length:384
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O15393 Pfam ID:PF15494, PF00089 EC:3.4.21.B60

Ligand Molecules

NAG

Primary Citation

Structural basis for the interaction between human coronavirus HKU1 spike receptor binding domain and its receptor TMPRSS2.

Gao, X, Zhu, K, Wang, L, Shang, K, Hua, L, Qin, B, Zhu, H, Ding, W, Cui, S.Show

Cell Discov 10 84 84 (2024)

PMID: 39112468 DOI: 10.1038/s41421-024-00717-5

Primary Citation of related structures