8YP9 image
Entry Detail
PDB ID:
8YP9
Keywords:
Title:
the crystal structure of wildtype Magnaporthe grisea oxidoreductase in complex with NADP
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-03-15
Release Date:
2025-03-19
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NADP-dependent oxidoreductase domain-containing protein
Chain IDs:A, B, C
Chain Length:332
Number of Molecules:3
Biological Source:Pyricularia grisea
Ligand Molecules
Primary Citation
Crystal Structure of an Aldo-keto Reductase MGG_00097 from Magnaporthe grisea.
Plant Pathol J 41 167 178 (2025)
PMID: 40211621 DOI: 10.5423/PPJ.OA.07.2024.0115

Abstact

The enzyme MGG_00097 from rice blast fungus (Magnaporthe grisea) is a NADPH-dependent oxidoreductase, involved in synthesizing glycerol from dihydroxyacetone phosphate and dihydroxyacetone. The 35.5-kDa monomer belongs to the aldo-keto reductase superfamily, characterized by a highly conserved catalytic tetrad. This study, elucidates the expression, purification, and kinetic properties of recombinant MGG_00097. The ternary complex of MGG_00097 with NADP+ and glycerol was refined to a 2.9 Å resolution, revealing critical insights into substrate binding and catalysis. NADP+ binds within the active site, with residues Ser221, Leu223, Ser225, Lys271, Ser272, Ser273, Thr274, Arg277, and Asn281 forming the substrate and cofactor-binding pockets. A Y56A mutation reveals the open conformation of the cofactor-binding pocket, with Glu29 and Gln226 functioning as hinge residues for the conformational changes upon cofactor binding. These findings contribute to the understanding of MGG_00097's catalytic mechanism and offer a basis for further biochemical and potential biotechnological applications.

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Primary Citation of related structures