8YNT image
Deposition Date 2024-03-11
Release Date 2024-12-18
Last Version Date 2025-01-08
Entry Detail
PDB ID:
8YNT
Keywords:
SIGNALING PROTEIN
Title:
Cryo-EM structure of SNAP-94847-bound MCHR1, S2 state
Biological Source:
Source Organism:
synthetic construct (Taxon ID: 32630)
Homo sapiens (Taxon ID: 9606)
Escherichia coli (Taxon ID: 562)
Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (Taxon ID: 199310)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.43 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8YNT validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Antibody 1B3 Fab heavy chain
Chain IDs:A (auth: H)
Chain Length:238
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Molecule:Antibody 1B3 Fab light chain
Chain IDs:B (auth: L)
Chain Length:220
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Molecule:Glue molecule 4-9
Chain IDs:C (auth: N)
Chain Length:285
Number of Molecules:1
Biological Source:synthetic construct
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Melanin-concentrating hormone receptor 1,Soluble cytochrome b562
Gene (Uniprot):cybC
Chain IDs:D (auth: R)
Chain Length:585
Number of Molecules:1
Biological Source:Homo sapiens, Escherichia coli, Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
UniProt ID:A0A2R9AFP0,P0ABE7 Pfam ID:PF00001, PF07361
Ligand Molecules
A1D6T
Primary Citation
Structural insights into physiological activation and antagonism of melanin-concentrating hormone receptor MCHR1.
Cell Discov 10 124 124 (2024)
PMID: 39616153 DOI: 10.1038/s41421-024-00754-0
Primary Citation of related structures
8YNT