ISDA

Entry Detail

PDB ID:

8YLC

Keywords:

HYDROLASE

Title:

The crystal structure of PDE4D with Amentoflavone

Biological Source:

Source Organism:

Homo sapiens

Host Organism:

Escherichia coli BL21

PDB Version:

Deposition Date:

2024-03-06

Release Date:

2024-06-12

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.30 Å

R-Value Free:

0.25

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:3',5'-cyclic-AMP phosphodiesterase 4D
Chain IDs:A, B
Chain Length:506
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q08499 Pfam ID:PF18100, PF00233 EC:3.1.4.53

Ligand Molecules

A1D6Q

Primary Citation

Discovery of amentoflavone as a natural PDE4 inhibitor with anti-fibrotic effects

Chen, Z, Shi, Y, Zhong, F, Zhang, K, Zhang, F, Xie, S, Cheng, Z, Zhou, Q, Huang, Y.Y, Luo, H.B.Show

Chin.Chem.Lett. ? 109956 ? (2024)

DOI: 10.1016/j.cclet.2024.109956

Primary Citation of related structures