ISDA: 8YKV

Deposition Date 2024-03-05

Release Date 2024-05-29

Last Version Date 2024-08-14

Entry Detail

PDB ID:

8YKV

Keywords:

MEMBRANE PROTEIN/IMMUNE SYSTEM

Title:

Cryo-EM structure of succinate receptor SUCR1 bound to compound 31

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
Rattus norvegicus (Taxon ID: 10116)
synthetic construct (Taxon ID: 32630)
Bos taurus (Taxon ID: 9913)

Host Organism:

Trichoplusia ni

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.48 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(i) subunit alpha-1
Gene (Uniprot):GNAI1
Mutagens:S47N,G203A,E245A,A326S
Chain IDs:A
Chain Length:354
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P63096 Pfam ID:PF00503

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Gene (Uniprot):Gnb1
Chain IDs:B
Chain Length:340
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:P54311 Pfam ID:PF00400

Polymer Type:polypeptide(L)
Molecule:Antibody fragment ScFv16
Chain IDs:C (auth: E)
Chain Length:247
Number of Molecules:1
Biological Source:synthetic construct

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Gene (Uniprot):GNG2
Chain IDs:D (auth: G)
Chain Length:71
Number of Molecules:1
Biological Source:Bos taurus

UniProt ID:P63212 Pfam ID:PF00631

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Succinate receptor 1
Gene (Uniprot):SUCNR1
Chain IDs:E (auth: R)
Chain Length:334
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9BXA5 Pfam ID:PF00001

Ligand Molecules