8YEF image
Deposition Date 2024-02-22
Release Date 2025-02-26
Last Version Date 2025-09-10
Entry Detail
PDB ID:
8YEF
Title:
HPV6 L1 pentamer in complex with Fab F5-77
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Heavy chain of F5-77
Chain IDs:A
Chain Length:120
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Light chain of F5-77
Chain IDs:B
Chain Length:107
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Major capsid protein L1
Gene (Uniprot):L1
Chain IDs:C, D (auth: H), E (auth: I), F (auth: J), G (auth: K)
Chain Length:449
Number of Molecules:5
Biological Source:Alphapapillomavirus 10
Ligand Molecules
Primary Citation
Establishing a universal IVRP method for quadrivalent HPV vaccines to replace in vivo potency tests.
Npj Vaccines 10 55 55 (2025)
PMID: 40118915 DOI: 10.1038/s41541-025-01106-z

Abstact

Several human papillomavirus (HPV) L1-based virus-like particle (VLP) vaccines are in development to meet future global vaccination needs. Type-specific monoclonal antibodies with good reactivity to all types of vaccines are urgently needed to evaluate vaccine potency. In this study, binding activity, neutralizing activity, conformational sensitivity, immunodominance in human serum, and versatility were compared among antibodies. A broad-spectrum binding antibody (C4-F5-127) was selected as the capture antibody; four type-specific neutralizing antibodies (6-F5-77, 11-F5-187, 16-F5-196, and 18-F5-203) were selected as detection antibodies for HPV6, 11, 16, and 18, respectively. These antibodies formed a standardized and universal in vitro relative potency (IVRP) assay kit. High-resolution cryo-electron microscopy (cryo-EM) structures of HPV6-6-F5-77, HPV11-11-F5-187, HPV16-16-F5-196 and HPV18-18-F5-203 complexes define the location and nature of epitopes, revealing serotype specific binding modes and neutralization mechanisms. The IVRP results were correlated with potency data from mouse models, offering an efficient alternative to in vivo potency experiments.

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Primary Citation of related structures