8YDD image
Deposition Date 2024-02-20
Release Date 2025-03-26
Last Version Date 2025-03-26
Entry Detail
PDB ID:
8YDD
Keywords:
NUCLEAR PROTEIN
Title:
Crystal structure of Nanog(R100A) in complex with Wdr5
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.50 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
8YDD validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:WD repeat-containing protein 5
Gene (Uniprot):Wdr5
Chain IDs:A, B, C
Chain Length:313
Number of Molecules:3
Biological Source:Mus musculus
UniProt ID:P61965 Pfam ID:PF00400
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Homeobox protein NANOG
Gene (Uniprot):Nanog
Mutagens:R100A
Chain IDs:D, E
Chain Length:61
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:Q80Z64 Pfam ID:PF00046
Primary Citation
Crystal structure of Nanog(R100A) in complex with Wdr5
To Be Published ? ? ? (?)
Primary Citation of related structures
8YDD