8YD7 image
Deposition Date 2024-02-19
Release Date 2024-05-15
Last Version Date 2024-10-16
Entry Detail
PDB ID:
8YD7
Keywords:
Title:
Structure of FADD/Caspase-8/cFLIP death effector domain assembly
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.32 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Caspase-8
Gene (Uniprot):CASP8
Mutagens:F122G,L123G
Chain IDs:B (auth: D), C, D (auth: B), E, J (auth: A)
Chain Length:185
Number of Molecules:5
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CASP8 and FADD-like apoptosis regulator subunit p12
Gene (Uniprot):CFLAR
Mutagens:H7G
Chain IDs:A (auth: G), F (auth: H), G (auth: I), H (auth: K)
Chain Length:181
Number of Molecules:4
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FAS-associated death domain protein
Gene (Uniprot):FADD
Mutagens:H9G
Chain IDs:I (auth: L)
Chain Length:216
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
Deciphering DED assembly mechanisms in FADD-procaspase-8-cFLIP complexes regulating apoptosis.
Nat Commun 15 3791 3791 (2024)
PMID: 38710704 DOI: 10.1038/s41467-024-47990-2

Abstact

Fas-associated protein with death domain (FADD), procaspase-8, and cellular FLICE-inhibitory proteins (cFLIP) assemble through death-effector domains (DEDs), directing death receptor signaling towards cell survival or apoptosis. Understanding their three-dimensional regulatory mechanism has been limited by the absence of atomic coordinates for their ternary DED complex. By employing X-ray crystallography and cryogenic electron microscopy (cryo-EM), we present the atomic coordinates of human FADD-procaspase-8-cFLIP complexes, revealing structural insights into these critical interactions. These structures illustrate how FADD and cFLIP orchestrate the assembly of caspase-8-containing complexes and offer mechanistic explanations for their role in promoting or inhibiting apoptotic and necroptotic signaling. A helical procaspase-8-cFLIP hetero-double layer in the complex appears to promote limited caspase-8 activation for cell survival. Our structure-guided mutagenesis supports the role of the triple-FADD complex in caspase-8 activation and in regulating receptor-interacting protein kinase 1 (RIPK1). These results propose a unified mechanism for DED assembly and procaspase-8 activation in the regulation of apoptotic and necroptotic signaling across various cellular pathways involved in development, innate immunity, and disease.

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Disease

Primary Citation of related structures
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