8Y9Q image
Entry Detail
PDB ID:
8Y9Q
Keywords:
Title:
b-glucosidase from Thermotoga profunda Tp-BGL
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-02-07
Release Date:
2025-02-12
Method Details:
Experimental Method:
Resolution:
1.96 Å
R-Value Free:
0.17
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:b-glucosidase
Chain IDs:A, B
Chain Length:448
Number of Molecules:2
Biological Source:Thermotoga profunda
Ligand Molecules
Primary Citation
Structural insights and functional characterization of a novel beta-glucosidase derived from Thermotoga profunda.
Biochem.Biophys.Res.Commun. 732 150405 150405 (2024)
PMID: 39033552 DOI: 10.1016/j.bbrc.2024.150405

Abstact

β-Glucosidase is a crucial cellulase, as its activity determines the efficiency of cellulose hydrolysis into glucose. This study addresses the functional and structural characteristics of Thermotoga profunda β-glucosidase (Tp-BGL). Tp-BGL exhibited a Km of 0.3798 mM for p-nitrophenyl-β-d-glucopyranoside (pNPGlc) and 4.44 mM for cellobiose, with kcat/Km of 1211.16 and 4.18 s-1 mM-1, respectively. In addition, Tp-BGL showed significant pH adaptability and thermal stability, with a Tm of 85.7 °C and retaining >90 % of its activity after incubation at 80 °C for 90 min. The crystal structure of Tp-BGL was resolved at 1.95 Å resolution, and reveals a typical TIM barrel structure. Comparative structural analysis highlighted that the major distinction between Tp-BGL and the other glucosidases lies in their loop regions.

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Primary Citation of related structures