8Y8Y image
Deposition Date 2024-02-06
Release Date 2024-07-10
Last Version Date 2024-07-10
Entry Detail
PDB ID:
8Y8Y
Keywords:
Title:
Crystal structure of the PTPN21 FERM domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tyrosine-protein phosphatase non-receptor type 21
Gene (Uniprot):PTPN21
Chain IDs:A
Chain Length:293
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural analysis of the FERM domain of human protein tyrosine phosphatase non-receptor type 21.
Acta Crystallogr.,Sect.F 80 148 153 (2024)
PMID: 38940939 DOI: 10.1107/S2053230X24005260

Abstact

Protein tyrosine phosphatase non-receptor type 21 (PTPN21) is a cytosolic protein tyrosine phosphatase that regulates cell growth and invasion. Due to its oncogenic properties, PTPN21 has recently emerged as a potential therapeutic target for cancer. In this study, the three-dimensional structure of the PTPN21 FERM domain was determined at 2.1 Å resolution by X-ray crystallography. The crystal structure showed that this domain harbors canonical FERM folding and consists of three subdomains that are tightly packed via highly conserved intramolecular hydrophobic interactions. Consistent with this, the PTPN21 FERM domain shares high structural homology with several other FERM domains. Moreover, structural superimposition demonstrated two putative protein-binding sites of the PTPN21 FERM domain, which are presumed to be associated with interaction with its binding partner, kinesin family member 1C. Thus, these data suggest that the FERM domain of PTPN21 serves as a module that mediates protein-protein interaction, like other FERM domains.

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Primary Citation of related structures