8Y6Q image
Deposition Date 2024-02-03
Release Date 2024-08-07
Last Version Date 2024-08-07
Entry Detail
PDB ID:
8Y6Q
Keywords:
Title:
Structure of the Dark/Dronc complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
7.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Apaf-1 related killer DARK
Gene (Uniprot):Dark
Chain IDs:A (auth: H), B (auth: J), C (auth: L), D (auth: M), E (auth: O), N (auth: Q), O (auth: I), P (auth: K)
Chain Length:1237
Number of Molecules:8
Biological Source:Drosophila melanogaster
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Caspase Dronc
Gene (Uniprot):Dronc
Chain IDs:F (auth: N), G (auth: A), H (auth: B), I (auth: C), J (auth: D), K (auth: E), L (auth: F), M (auth: G)
Chain Length:102
Number of Molecules:8
Biological Source:Drosophila melanogaster
Ligand Molecules
Primary Citation
Dark and Dronc activation in Drosophila melanogaster.
Proc.Natl.Acad.Sci.USA 121 e2312784121 e2312784121 (2024)
PMID: 38381783 DOI: 10.1073/pnas.2312784121

Abstact

The onset of apoptosis is characterized by a cascade of caspase activation, where initiator caspases are activated by a multimeric adaptor complex known as the apoptosome. In Drosophila melanogaster, the initiator caspase Dronc undergoes autocatalytic activation in the presence of the Dark apoptosome. Despite rigorous investigations, the activation mechanism for Dronc remains elusive. Here, we report the cryo-EM structures of an auto-inhibited Dark monomer and a single-layered, multimeric Dark/Dronc complex. Our biochemical analysis suggests that the auto-inhibited Dark oligomerizes upon binding to Dronc, which is sufficient for the activation of both Dark and Dronc. In contrast, the previously observed double-ring Dark apoptosome may represent a non-functional or "off-pathway" conformation. These findings expand our understanding on the molecular mechanism of apoptosis in Drosophila.

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Primary Citation of related structures