8Y22 image
Deposition Date 2024-01-25
Release Date 2024-06-26
Last Version Date 2024-10-30
Entry Detail
PDB ID:
8Y22
Keywords:
Title:
FGFR1 kinase domain with a covalent inhibitor 9g
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.79 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fibroblast growth factor receptor 1
Gene (Uniprot):FGFR1
Mutations:C127S
Chain IDs:A (auth: B), B (auth: A)
Chain Length:308
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Design, synthesis and biological evaluation of 5-amino-1H-pyrazole-4-carboxamide derivatives as pan-FGFR covalent inhibitors.
Eur.J.Med.Chem. 275 116558 116558 (2024)
PMID: 38870833 DOI: 10.1016/j.ejmech.2024.116558

Abstact

The aberrant activation of FGFRs plays a critical role in various cancers, leading to the development of several FGFR inhibitors in clinic. However, the emergence of drug resistance, primarily due to gatekeeper mutations in FGFRs, has limited their clinical efficacy. To address the unmet medical need, a series of 5-amino-1H-pyrazole-4-carboxamide derivatives were designed and synthesized as novel pan-FGFR covalent inhibitors targeting both wild-type and the gatekeeper mutants. The representative compound 10h demonstrated nanomolar activities against FGFR1, FGFR2, FGFR3 and FGFR2 V564F gatekeeper mutant in biochemical assays (IC50 = 46, 41, 99, and 62 nM). Moreover, 10h also strongly suppressed the proliferation of NCI-H520 lung cancer cells, SNU-16 and KATO III gastric cancer cells with IC50 values of 19, 59, and 73 nM, respectively. Further X-ray co-crystal structure revealed that 10h irreversibly binds to FGFR1. The study provides a new promising point for anticancer drug development medicated by FGFRs.

Legend

Protein

Chemical

Disease

Primary Citation of related structures