8Y1D image
Deposition Date 2024-01-24
Release Date 2024-05-01
Last Version Date 2024-10-23
Entry Detail
PDB ID:
8Y1D
Keywords:
VIRAL PROTEIN/HYDROLASE
Title:
2up-TM conformation of HKU1-B S protein after incubation of the receptor
Biological Source:
Source Organism:
Human coronavirus HKU1 (isolate N2) (Taxon ID: 443240)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8Y1D validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A, B, C
Chain Length:1290
Number of Molecules:3
Biological Source:Human coronavirus HKU1 (isolate N2)
UniProt ID:Q14EB0 Pfam ID:PF16451, PF09408, PF19209, PF01601
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transmembrane protease serine 2
Gene (Uniprot):TMPRSS2
Chain IDs:D, E
Chain Length:384
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:O15393 Pfam ID:PF15494, PF00089 EC:3.4.21.B60
Ligand Molecules
NAG
Primary Citation
Structural basis for the recognition of HCoV-HKU1 by human TMPRSS2.
Cell Res. 34 526 529 (2024)
PMID: 38641728 DOI: 10.1038/s41422-024-00958-9
Primary Citation of related structures
8Y1D
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