8Y02 image
Deposition Date 2024-01-21
Release Date 2025-06-11
Last Version Date 2025-06-11
Entry Detail
PDB ID:
8Y02
Keywords:
STRUCTURAL PROTEIN
Title:
Cryo-EM structure of Short-wave-sensitive opsin 1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Bos taurus (Taxon ID: 9913)
Host Organism:
Spodoptera frugiperda
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.61 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8Y02 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(i) subunit alpha-1
Gene (Uniprot):GNAI1
Mutations:S47C, G202T, G203A, E245A, A326S
Chain IDs:B (auth: A)
Chain Length:354
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P63096 Pfam ID:PF00503
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Gene (Uniprot):GNB1
Chain IDs:C (auth: B)
Chain Length:340
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62873 Pfam ID:PF00400
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Gene (Uniprot):GNG2
Chain IDs:D (auth: G)
Chain Length:71
Number of Molecules:1
Biological Source:Bos taurus
UniProt ID:P63212 Pfam ID:PF00631
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Short-wave-sensitive opsin 1
Gene (Uniprot):OPN1SW
Mutations:E110Q
Chain IDs:A (auth: R)
Chain Length:348
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P03999 Pfam ID:PF00001
Polymer Type:polypeptide(L)
Molecule:scFv Recombinant Human Monoclonal Antibody (scFv16)
Chain IDs:E (auth: S)
Chain Length:267
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
RET
Primary Citation
Cryo-EM structure of Short-wave-sensitive opsin 1
To Be Published ? ? ? (?)
Primary Citation of related structures
8Y02