8XWV image
Entry Detail
PDB ID:
8XWV
EMDB ID:
Title:
Structure of CXCR2 bound to CXCL1 (CXCR2-CXCL1-Go Full map)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-01-16
Release Date:
2025-01-22
Method Details:
Experimental Method:
Resolution:
3.07 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(o) subunit alpha
Mutations:G42D,E43N,A227D,G230D,I332A,V335I
Chain IDs:D (auth: A)
Chain Length:240
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Chain IDs:E (auth: B)
Chain Length:350
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Growth-regulated alpha protein
Chain IDs:A (auth: D), B (auth: E)
Chain Length:73
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Chain IDs:F (auth: G)
Chain Length:56
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Antibody fragment ScFv16
Chain IDs:G (auth: H)
Chain Length:256
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:C-X-C chemokine receptor type 2
Chain IDs:C (auth: R)
Chain Length:416
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Molecular basis of promiscuous chemokine binding and structural mimicry at the C-X-C chemokine receptor, CXCR2.
Mol.Cell 85 976 988.e9 (2025)
PMID: 39978339 DOI: 10.1016/j.molcel.2025.01.024

Abstact

Selectivity of natural agonists for their cognate receptors is a hallmark of G-protein-coupled receptors (GPCRs); however, this selectivity often breaks down at the chemokine receptors. Chemokines often display promiscuous binding to chemokine receptors, but the underlying molecular determinants remain mostly elusive. Here, we perform a comprehensive transducer-coupling analysis, testing all known C-X-C chemokines on every C-X-C type chemokine receptor to generate a global fingerprint of the selectivity and promiscuity encoded within this system. Taking lead from this, we determine cryoelectron microscopy (cryo-EM) structures of the most promiscuous receptor, C-X-C chemokine receptor 2 (CXCR2), in complex with several chemokines. These structural snapshots elucidate the details of ligand-receptor interactions, including structural motifs, which are validated using mutagenesis and functional experiments. We also observe that most chemokines position themselves on CXCR2 as a dimer while CXCL6 exhibits a monomeric binding pose. Taken together, our findings provide the molecular basis of chemokine promiscuity at CXCR2 with potential implications for developing therapeutic molecules.

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