8XWG image
Entry Detail
PDB ID:
8XWG
Title:
OspA variants for thioflavin-T binding
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-01-16
Release Date:
2024-11-27
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Outer Surface Protein A
Chain IDs:A
Chain Length:320
Number of Molecules:1
Biological Source:Borreliella burgdorferi
Primary Citation
Redesign of a thioflavin-T-binding protein with a flat beta-sheet to evaluate a thioflavin-T-derived photocatalyst with enhanced affinity.
Int.J.Biol.Macromol. 269 131992 131992 (2024)
PMID: 38697433 DOI: 10.1016/j.ijbiomac.2024.131992

Abstact

Amyloids, proteinous aggregates with β-sheet-rich fibrils, are involved in several neurodegenerative diseases such as Alzheimer's disease; thus, their detection is critically important. The most common fluorescent dye for amyloid detection is thioflavin-T (ThT), which shows on/off fluorescence upon amyloid binding. We previously reported that an engineered globular protein with a flat β-sheet, peptide self-assembly mimic (PSAM), can be used as an amyloid binding model. In this study, we further explored the residue-specific properties of ThT-binding to the flat β-sheet by introducing systematic mutations. We found that site-specific mutations at the ThT-binding channel enhanced affinity. We also evaluated the binding of a ThT-based photocatalyst, which showed the photooxygenation activity on the amyloid fibril upon light radiation. Upon binding of the photocatalyst to the PSAM variant, singlet oxygen-generating activity was observed. The results of this study expand our understanding of the detailed binding mechanism of amyloid-specific molecules.

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