8XUM image
Deposition Date 2024-01-13
Release Date 2025-01-15
Last Version Date 2025-12-24
Entry Detail
PDB ID:
8XUM
Title:
Structure of LGR4 with RSPO2
Biological Source:
Source Organism:
Camelus bactrianus (Taxon ID: 9837)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Leucine-rich repeat-containing G-protein coupled receptor 4
Gene (Uniprot):LGR4
Chain IDs:B (auth: A)
Chain Length:951
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:R-spondin-2
Gene (Uniprot):RSPO2
Chain IDs:C (auth: B)
Chain Length:243
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:MB52
Chain IDs:A (auth: C)
Chain Length:110
Number of Molecules:1
Biological Source:Camelus bactrianus
Ligand Molecules
Primary Citation
Cryo-EM structure of the full-length LGR4-RSPOs complex and a targeting nanobody for anti-obesity therapy.
Nat Commun 16 8406 8406 (2025)
PMID: 40998774 DOI: 10.1038/s41467-025-63410-5

Abstact

Obesity poses a substantial threat to human health but lacks effective management. Recent advancements in large-scale deep sequencing and cryo-electron microscopy (cryo-EM) have transformed drug discovery paradigms. Leveraging prior genetics investigation, we pinpointed Leucine-rich repeat-containing G protein-coupled receptor 4 (LGR4) as a promising target for combating obesity. Here, we present cryo-EM structures of full-length LGR4 alone and in complex with RSPO2(FU). Notably, we develop an inhibitory nanobody (NB21) that blocks the binding of RSPO1/2 to LGR4, and we also determine the structure of the LGR4-NB21 complex. NB21-mFc (NB21 fused with mouse IgG2) effectively inhibits the canonical Wnt signaling pathway, thereby enhancing mitochondrial respiration and thermogenesis in beige adipocytes. In vivo, NB21-mFc increases energy expenditure by promoting the browning of white fat, conferring resistance to both diet-induced and genetic (ob/ob) obesity. Furthermore, LGR4 deficiency abolishes the effects of NB21-mFc in boosting the browning program and subsequent weight reduction. In summary, our study unveils structural insights into the LGR4-RSPOs and LGR4-NB21 complexes, paving the way for the development of an LGR4-targeting nanobody for weight loss.

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Primary Citation of related structures
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