8XRP image
Entry Detail
PDB ID:
8XRP
EMDB ID:
Keywords:
Title:
The Cryo-EM structure of IL-12, receptor subunit beta-1 and receptor subunit beta-2 complex
Biological Source:
PDB Version:
Deposition Date:
2024-01-07
Release Date:
2024-07-24
Method Details:
Experimental Method:
Resolution:
3.75 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Interleukin-12 subunit alpha
Chain IDs:A, E, I, M
Chain Length:207
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Interleukin-12 subunit beta
Chain IDs:B, F, J, N
Chain Length:307
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Interleukin-12 receptor subunit beta-2
Chain IDs:C, G, K, O
Chain Length:302
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Interleukin-12 receptor subunit beta-1
Chain IDs:D, H, L, P
Chain Length:219
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure and assembly of the human IL-12 signaling complex.
Structure 32 1640 ? (2024)
PMID: 39111304 DOI: 10.1016/j.str.2024.07.010

Abstact

Interleukin (IL)-12 is a heterodimeric pro-inflammatory cytokine. Our cryoelectron microscopy structure determination of human IL-12 in complex with IL-12Rβ1 and IL-12Rβ2 at a resolution of 3.75 Å reveals that IL-12Rβ2 primarily interacts with the IL-12p35 subunit via its N-terminal Ig-like domain, while IL-12Rβ1 binds to the p40 subunit with its N-terminal fibronectin III domain. This binding mode of IL-12 with its receptors is similar to that of IL-23 but shows notable differences with other cytokines. Through structural information and biochemical assays, we identified Y62, Y189, and K192 as key residues in IL-12p35, which bind to IL-12Rβ2 with high affinity and mediate IL-12 signal transduction. Furthermore, structural comparisons reveal two distinctive conformational states and structural plasticity of the heterodimeric interface in IL-12. As a result, our study advances our understanding of IL-12 signal initiation and opens up new opportunities for the engineering and therapeutic targeting of IL-12.

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