8XQC image
Deposition Date 2024-01-05
Release Date 2025-01-15
Last Version Date 2025-06-25
Entry Detail
PDB ID:
8XQC
Keywords:
TRANSFERASE
Title:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated PAF15 and hemimethylated DNA analog
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Host Organism:
Spodoptera frugiperda
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.25 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8XQC validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA (cytosine-5)-methyltransferase 1
Gene (Uniprot):DNMT1
Chain IDs:A
Chain Length:1271
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P26358 Pfam ID:PF12047, PF02008, PF01426, PF00145 EC:2.1.1.37
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*CP*TP*TP*AP*(5CM)P*GP*GP*AP*AP*GP*G)-3')
Chain IDs:B
Chain Length:12
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*CP*TP*TP*CP*(C55)P*GP*TP*AP*AP*GP*T)-3')
Chain IDs:C
Chain Length:12
Number of Molecules:1
Biological Source:synthetic construct
Primary Citation
Activation of DNMT1 by Chemically Synthesized Dual monoubiquitinated PAF15 Protein
To Be Published ? ? ? (?)
Primary Citation of related structures
8XQC