8XNV image
Entry Detail
PDB ID:
8XNV
EMDB ID:
Title:
Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type II, Wild type mouse under Cold Acclimation
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-12-30
Release Date:
2024-10-30
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 3
Chain IDs:A
Chain Length:115
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
Chain IDs:B
Chain Length:84
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial
Chain IDs:C
Chain Length:263
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial
Chain IDs:D
Chain Length:463
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
Chain IDs:E
Chain Length:248
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
Chain IDs:F
Chain Length:464
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Chain IDs:G
Chain Length:727
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 1
Chain IDs:H
Chain Length:318
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
Chain IDs:I
Chain Length:212
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial
Chain IDs:J (auth: P)
Chain Length:377
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Chain IDs:K (auth: Q)
Chain Length:175
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Chain IDs:L (auth: R)
Chain Length:116
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Chain IDs:M (auth: S)
Chain Length:99
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Acyl carrier protein, mitochondrial
Chain IDs:N (auth: T)
Chain Length:156
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
Chain IDs:O (auth: V)
Chain Length:116
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Chain IDs:P (auth: W)
Chain Length:131
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
Chain IDs:Q (auth: X)
Chain Length:172
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
Chain IDs:R (auth: Z)
Chain Length:144
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Chain IDs:S (auth: a)
Chain Length:115
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3
Chain IDs:T (auth: b)
Chain Length:84
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Chain IDs:U (auth: q)
Chain Length:175
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7
Chain IDs:V (auth: r)
Chain Length:116
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial
Chain IDs:W (auth: s)
Chain Length:99
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Structural basis of respiratory complex adaptation to cold temperatures.
Cell 187 6584 ? (2024)
PMID: 39395414 DOI: 10.1016/j.cell.2024.09.029

Abstact

In response to cold, mammals activate brown fat for respiratory-dependent thermogenesis reliant on the electron transport chain. Yet, the structural basis of respiratory complex adaptation upon cold exposure remains elusive. Herein, we combined thermoregulatory physiology and cryoelectron microscopy (cryo-EM) to study endogenous respiratory supercomplexes from mice exposed to different temperatures. A cold-induced conformation of CI:III2 (termed type 2) supercomplex was identified with a ∼25° rotation of CIII2 around its inter-dimer axis, shortening inter-complex Q exchange space, and exhibiting catalytic states that favor electron transfer. Large-scale supercomplex simulations in mitochondrial membranes reveal how lipid-protein arrangements stabilize type 2 complexes to enhance catalytic activity. Together, our cryo-EM studies, multiscale simulations, and biochemical analyses unveil the thermoregulatory mechanisms and dynamics of increased respiratory capacity in brown fat at the structural and energetic level.

Legend

Protein

Chemical

Disease

Primary Citation of related structures