8XCM image
Deposition Date 2023-12-09
Release Date 2024-05-22
Last Version Date 2025-09-17
Entry Detail
PDB ID:
8XCM
Keywords:
OXIDOREDUCTASE
Title:
Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus variant-N1146Q
Biological Source:
Source Organism:
Gluconobacter japonicus (Taxon ID: 376620)
Host Organism:
Gluconobacter oxydans
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.08 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8XCM validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fructose dehydrogenase large subunit
Gene (Uniprot):fdhL
Mutagens:N1146Q
Chain IDs:A
Chain Length:544
Number of Molecules:1
Biological Source:Gluconobacter japonicus
UniProt ID:M1VMF7 Pfam ID:PF00732, PF13450, PF05199
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fructose dehydrogenase small subunit
Gene (Uniprot):fdhS
Mutagens:N1146Q
Chain IDs:B
Chain Length:183
Number of Molecules:1
Biological Source:Gluconobacter japonicus
UniProt ID:M1VB40 Pfam ID:PF12318
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fructose dehydrogenase cytochrome subunit
Gene (Uniprot):fdhC
Mutagens:N1146Q
Chain IDs:C
Chain Length:486
Number of Molecules:1
Biological Source:Gluconobacter japonicus
UniProt ID:M1V1V5 Pfam ID:PF00034, PF13442
Ligand Molecules
F3S
FAD
HEC
U10
Primary Citation
Structural and electrochemical elucidation of biocatalytic mechanisms in direct electron transfer-type D-fructose dehydrogenase.
Electrochim Acta 490 ? ? (2024)
DOI: 10.1016/j.electacta.2024.144271
Primary Citation of related structures
8XCM