ISDA: 8XCA

Deposition Date 2023-12-08

Release Date 2024-12-11

Last Version Date 2025-08-20

Entry Detail

PDB ID:

8XCA

Keywords:

RNA BINDING PROTEIN/RNA/DNA

Title:

Cryo-EM structure of Cas12o1, crRNA and target DNA complex

Biological Source:

Source Organism:

unidentified (Taxon ID: 32644)
unclassified sequences (Taxon ID: 12908)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.10 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:CasJ19
Chain IDs:A
Chain Length:908
Number of Molecules:1
Biological Source:unidentified

Polymer Type:polyribonucleotide
Molecule:CrRNA
Chain IDs:B
Chain Length:60
Number of Molecules:1
Biological Source:unclassified sequences

Polymer Type:polydeoxyribonucleotide
Molecule:TS-DNA
Chain IDs:C
Chain Length:44
Number of Molecules:1
Biological Source:unclassified sequences

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*AP*CP*GP*AP*TP*AP*TP*G)-3')
Chain IDs:D
Chain Length:44
Number of Molecules:1
Biological Source:unclassified sequences

Ligand Molecules

Primary Citation

Structure and genome editing activity of the novel CRISPR-Cas12o1 effector.

Duan, Z, Zhang, X, Zhang, J.T, Ji, X, Liu, R, Chen, Y, Li, S, Jia, N, Gao, H, Xin, Y, Jia, N, Zhu, J.K.Show

Cell Res. 35 145 148 (2025)

PMID: 39516663 DOI: 10.1038/s41422-024-01050-y

Primary Citation of related structures

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