8X99 image
Entry Detail
PDB ID:
8X99
EMDB ID:
Keywords:
Title:
Cryo-EM structure of coxsackievirus A16 A-particle in complex with Fab h1A6.2
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-11-29
Release Date:
2024-09-04
Method Details:
Experimental Method:
Resolution:
3.38 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Capsid protein VP1
Chain IDs:A
Chain Length:297
Number of Molecules:1
Biological Source:Coxsackievirus A16
Polymer Type:polypeptide(L)
Description:Capsid protein VP2
Chain IDs:B
Chain Length:254
Number of Molecules:1
Biological Source:Coxsackievirus A16
Polymer Type:polypeptide(L)
Description:Capsid protein VP3
Chain IDs:C
Chain Length:242
Number of Molecules:1
Biological Source:Coxsackievirus A16
Ligand Molecules
Primary Citation
Broadly therapeutic antibody provides cross-serotype protection against enteroviruses via Fc effector functions and by mimicking SCARB2.
Nat Microbiol 9 2939 2953 (2024)
PMID: 39424982 DOI: 10.1038/s41564-024-01822-7

Abstact

Enteroviruses contain multiple serotypes and can cause severe neurological complications. The intricate life cycle of enteroviruses involving dynamic virus-receptor interaction hampers the development of broad therapeutics and vaccines. Here, using function-based screening, we identify a broadly therapeutic antibody h1A6.2 that potently protects mice in lethal models of infection with both enterovirus A71 and coxsackievirus A16 through multiple mechanisms, including inhibition of the virion-SCARB2 interactions and monocyte/macrophage-dependent Fc effector functions. h1A6.2 mitigates inflammation and improves intramuscular mechanics, which are associated with diminished innate immune signalling and preserved tissue repair. Moreover, cryogenic electron microscopy structures delineate an adaptive binding of h1A6.2 to the flexible and dynamic nature of the VP2 EF loop with a binding angle mimicking the SCARB2 receptor. The coordinated binding mode results in efficient binding of h1A6.2 to all viral particle types and facilitates broad neutralization of enterovirus, therefore informing a promising target for the structure-guided design of pan-enterovirus vaccine.

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Primary Citation of related structures