8X2U image
Entry Detail
PDB ID:
8X2U
EMDB ID:
Title:
Radial spoke head-neck dimer
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-11-10
Release Date:
2024-02-07
Method Details:
Experimental Method:
Resolution:
3.57 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DPY30 domain containing 2
Chain IDs:A, K (auth: C)
Chain Length:159
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:DnaJ homolog subfamily B member 13
Chain IDs:B, L (auth: K)
Chain Length:349
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Radial spoke head protein 3 homolog B
Chain IDs:C (auth: D), M (auth: L)
Chain Length:276
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Nucleoside diphosphate kinase homolog 5
Chain IDs:D (auth: E), N (auth: M)
Chain Length:225
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Radial spoke head 1 homolog
Chain IDs:E (auth: F), H (auth: I), O (auth: N), R (auth: Q)
Chain Length:313
Number of Molecules:4
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Radial spoke head protein 4 homolog A
Chain IDs:F (auth: G), I (auth: J), P (auth: O), S (auth: R)
Chain Length:716
Number of Molecules:4
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Radial spoke head protein 9 homolog
Chain IDs:G (auth: H), J (auth: c), Q (auth: P), T (auth: d)
Chain Length:276
Number of Molecules:4
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Multi-scale structures of the mammalian radial spoke and divergence of axonemal complexes in ependymal cilia.
Nat Commun 15 362 362 (2024)
PMID: 38191553 DOI: 10.1038/s41467-023-44577-1

Abstact

Radial spokes (RS) transmit mechanochemical signals between the central pair (CP) and axonemal dynein arms to coordinate ciliary motility. Atomic-resolution structures of metazoan RS and structures of axonemal complexes in ependymal cilia, whose rhythmic beating drives the circulation of cerebrospinal fluid, however, remain obscure. Here, we present near-atomic resolution cryo-EM structures of mouse RS head-neck complex in both monomer and dimer forms and reveal the intrinsic flexibility of the dimer. We also map the genetic mutations related to primary ciliary dyskinesia and asthenospermia on the head-neck complex. Moreover, we present the cryo-ET and sub-tomogram averaging map of mouse ependymal cilia and build the models for RS1-3, IDAs, and N-DRC. Contrary to the conserved RS structure, our cryo-ET map reveals the lack of IDA-b/c/e and the absence of Tektin filaments within the A-tubule of doublet microtubules in ependymal cilia compared with mammalian respiratory cilia and sperm flagella, further exemplifying the structural diversity of mammalian motile cilia. Our findings shed light on the stepwise mammalian RS assembly mechanism, the coordinated rigid and elastic RS-CP interaction modes beneficial for the regulation of asymmetric ciliary beating, and also facilitate understanding on the etiology of ciliary dyskinesia-related ciliopathies and on the ependymal cilia in the development of hydrocephalus.

Legend

Protein

Chemical

Disease

Primary Citation of related structures