8X0M image
Deposition Date 2023-11-04
Release Date 2024-11-27
Last Version Date 2025-07-02
Entry Detail
PDB ID:
8X0M
Keywords:
VIRAL PROTEIN
Title:
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(5-fold)
Biological Source:
Source Organism:
Semliki Forest virus (Taxon ID: 11033)
Semliki Forest virus (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8X0M validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Capsid protein
Chain IDs:A, D (auth: E), G (auth: I)
Chain Length:162
Number of Molecules:3
Biological Source:Semliki Forest virus
UniProt ID:P03315 Pfam ID:PF00944, PF00943
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein E2
Chain IDs:B, E (auth: F), H (auth: J)
Chain Length:418
Number of Molecules:3
Biological Source:Semliki Forest virus
UniProt ID:P03315 Pfam ID:PF00944, PF00943
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein E1
Chain IDs:C, F (auth: G), I (auth: K)
Chain Length:438
Number of Molecules:3
Biological Source:Semliki Forest virus
UniProt ID:P03315 Pfam ID:PF00944, PF00943
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Very low-density lipoprotein receptor
Gene (Uniprot):VLDLR
Chain IDs:J (auth: D), K (auth: H)
Chain Length:37
Number of Molecules:2
Biological Source:Semliki Forest virus
UniProt ID:P98155 Pfam ID:PF00057
Ligand Molecules
CA
NAG
Primary Citation
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(5-fold)
To Be Published ? ? ? (?)
Primary Citation of related structures
8X0M