8WYR image
Entry Detail
PDB ID:
8WYR
EMDB ID:
Keywords:
Title:
Cryo-EM structure of human CD5L bound to IgM-Fc/J
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-10-31
Release Date:
2024-10-09
Method Details:
Experimental Method:
Resolution:
3.39 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Interleukin-2,Isoform 1 of Immunoglobulin heavy constant mu
Chain IDs:A, B, C, D, E, F, G, H, J (auth: K), K (auth: L)
Chain Length:403
Number of Molecules:10
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Immunoglobulin J chain
Chain IDs:I (auth: J)
Chain Length:168
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Interleukin-2,CD5 antigen-like
Chain IDs:L (auth: M)
Chain Length:359
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
CD5L associates with IgM via the J chain.
Nat Commun 15 8397 8397 (2024)
PMID: 39333069 DOI: 10.1038/s41467-024-52175-y

Abstact

CD5 antigen-like (CD5L), also known as Spα or AIM (Apoptosis inhibitor of macrophage), emerges as an integral component of serum immunoglobulin M (IgM). However, the molecular mechanism underlying the interaction between IgM and CD5L has remained elusive. In this study, we present a cryo-electron microscopy structure of the human IgM pentamer core in complex with CD5L. Our findings reveal that CD5L binds to the joining chain (J chain) in a Ca2+-dependent manner and further links to IgM via a disulfide bond. We further corroborate recently published data that CD5L reduces IgM binding to the mucosal transport receptor pIgR, but does not impact the binding of the IgM-specific receptor FcμR. Additionally, CD5L does not interfere with IgM-mediated complement activation. These results offer a more comprehensive understanding of IgM and shed light on the function of the J chain in the immune system.

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