8WX7 image
Entry Detail
PDB ID:
8WX7
Keywords:
Title:
Crystal structure of SHP2 in complex with JAB-3186
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-10-27
Release Date:
2024-08-14
Method Details:
Experimental Method:
Resolution:
2.02 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Tyrosine-protein phosphatase non-receptor type 11
Chain IDs:A, B
Chain Length:526
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Discovery of JAB-3312, a Potent SHP2 Allosteric Inhibitor for Cancer Treatment.
J.Med.Chem. 67 13534 13549 (2024)
PMID: 39110625 DOI: 10.1021/acs.jmedchem.4c00360

Abstact

As an oncogenic phosphatase, SHP2 acts as a converging node in the RTK-RAS-MAPK signaling pathway in cancer cells and suppresses antitumor immunity by passing signals downstream of PD-1. Here, we utilized the extra druggable pocket outside the previously identified SHP2 allosteric tunnel site by the (6,5 fused), 6 spirocyclic system. The optimized compound, JAB-3312, exhibited a SHP2 binding Kd of 0.37 nM, SHP2 enzymatic IC50 of 1.9 nM, KYSE-520 antiproliferative IC50 of 7.4 nM and p-ERK inhibitory IC50 of 0.23 nM. For JAB-3312, an oral dose of 1.0 mg/kg QD was sufficient to achieve 95% TGI in KYSE-520 xenograft model of mouse. JAB-3312 was well-tolerated in animal models, and a close correlation was observed between the plasma concentration of JAB-3312 and the p-ERK inhibition in tumors. Currently, JAB-3312 is undergoing clinical trials as a potential anticancer agent.

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