8WKJ image
Deposition Date 2023-09-27
Release Date 2023-12-06
Last Version Date 2023-12-06
Entry Detail
PDB ID:
8WKJ
Keywords:
Title:
The crystal structure of aspartate aminotransferases Lpg0070 from Legionella pneumophila
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.17
R-Value Work:
0.15
Space Group:
I 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Aminotransferase
Gene (Uniprot):DIZ43_09905, ERS253283_01083, JBJ86_11885, NCTC12000_00087, O6C86_02110
Chain IDs:A
Chain Length:399
Number of Molecules:1
Biological Source:Legionella pneumophila
Ligand Molecules
Primary Citation
Crystal structure of an aspartate aminotransferase Lpg0070 from Legionella pneumophila.
Biochem.Biophys.Res.Commun. 689 149230 149230 (2023)
PMID: 37984176 DOI: 10.1016/j.bbrc.2023.149230

Abstact

Legionella pneumophila aspartate aminotransferase (Lpg0070) is a member of the transaminase and belongs to the pyridoxal 5'-phosphate (PLP)-dependent superfamily. It is responsible for the transfer of α-amino between aspartate and α-ketoglutarate to form glutamate and oxaloacetate. Here, we report the crystal structure of Lpg0070 at the resolution of 2.14 Å and 1.7 Å, in apo-form and PLP-bound, respectively. Our structural analysis revealed the specific residues involved in the PLP binding and free form against PLP-bound supported conformational changes before substrate recognition. In vitro enzyme activity proves that the absence of the N-terminal arm reduces the enzyme activity of Lpg0070. These data provide further evidence to support the N-terminal arm plays a crucial role in catalytic activity.

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Primary Citation of related structures