8WHN image
Entry Detail
PDB ID:
8WHN
Keywords:
Title:
Crystal Structure of the cytoplasmic domain of OST1 (Ribophorin I) from Candidatus Prometheoarchaeum syntrophicum strain MK-D1
Biological Source:
PDB Version:
Deposition Date:
2023-09-23
Release Date:
2024-09-25
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Work:
0.21
R-Value Observed:
0.24
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ribophorin 1 superfamily protein
Mutations:I532M
Chain IDs:A
Chain Length:161
Number of Molecules:1
Biological Source:Candidatus Prometheoarchaeum syntrophicum
Primary Citation
Intercompatibility of eukaryotic and Asgard archaea ribosome-translocon machineries.
J.Biol.Chem. 300 107673 107673 (2024)
PMID: 39128722 DOI: 10.1016/j.jbc.2024.107673

Abstact

In all domains of life, the ribosome-translocon complex inserts nascent transmembrane proteins into, and processes and transports signal peptide-containing proteins across, membranes. Eukaryotic translocons are anchored in the endoplasmic reticulum, while the prokaryotic complexes reside in cell membranes. Phylogenetic analyses indicate the inheritance of eukaryotic Sec61/oligosaccharyltransferase/translocon-associated protein translocon subunits from an Asgard archaea ancestor. However, the mechanism for translocon migration from a peripheral membrane to an internal cellular compartment (the proto-endoplasmic reticulum) during eukaryogenesis is unknown. Here we show compatibility between the eukaryotic ribosome-translocon complex and Asgard signal peptides and transmembrane proteins. We find that Asgard translocon proteins from Candidatus Prometheoarchaeum syntrophicum strain Candidatus Prometheoarchaeum syntrophicum strain MK-D1, a Lokiarchaeon confirmed to contain no internal cellular membranes, are targeted to the eukaryotic endoplasmic reticulum on ectopic expression. Furthermore, we show that the cytoplasmic domain of Candidatus Prometheoarchaeum syntrophicum strain MK-D1 oligosaccharyltransferase 1 (ribophorin I) can interact with eukaryotic ribosomes. Our data indicate that the location of existing ribosome-translocon complexes, at the protein level, determines the future placement of yet-to-be-translated translocon subunits. This principle predicts that during eukaryogenesis, under positive selection pressure, the relocation of a few translocon complexes to the proto-endoplasmic reticulum will have contributed to propagating the new translocon location, leading to their loss from the cell membrane.

Legend

Protein

Chemical

Disease

Primary Citation of related structures