8WE8 image
Deposition Date 2023-09-17
Release Date 2023-12-06
Last Version Date 2024-11-20
Entry Detail
PDB ID:
8WE8
Title:
Human L-type voltage-gated calcium channel Cav1.2 in the presence of calciseptine, amlodipine and pinaverium at 2.9 Angstrom resolution
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Voltage-dependent L-type calcium channel subunit alpha-1C
Gene (Uniprot):CACNA1C
Chain IDs:A
Chain Length:2201
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Calciseptin
Chain IDs:D (auth: B)
Chain Length:60
Number of Molecules:1
Biological Source:Dendroaspis polylepis polylepis
Polymer Type:polypeptide(L)
Molecule:Voltage-dependent L-type calcium channel subunit beta-3
Gene (Uniprot):CACNB3
Chain IDs:C
Chain Length:484
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Voltage-dependent calcium channel subunit alpha-2/delta-1
Gene (Uniprot):CACNA2D1
Chain IDs:B (auth: D)
Chain Length:1103
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural basis for human Ca v 1.2 inhibition by multiple drugs and the neurotoxin calciseptine.
Cell 186 5363 5374.e16 (2023)
PMID: 37972591 DOI: 10.1016/j.cell.2023.10.007

Abstact

Cav1.2 channels play crucial roles in various neuronal and physiological processes. Here, we present cryo-EM structures of human Cav1.2, both in its apo form and in complex with several drugs, as well as the peptide neurotoxin calciseptine. Most structures, apo or bound to calciseptine, amlodipine, or a combination of amiodarone and sofosbuvir, exhibit a consistent inactivated conformation with a sealed gate, three up voltage-sensing domains (VSDs), and a down VSDII. Calciseptine sits on the shoulder of the pore domain, away from the permeation path. In contrast, when pinaverium bromide, an antispasmodic drug, is inserted into a cavity reminiscent of the IFM-binding site in Nav channels, a series of structural changes occur, including upward movement of VSDII coupled with dilation of the selectivity filter and its surrounding segments in repeat III. Meanwhile, S4-5III merges with S5III to become a single helix, resulting in a widened but still non-conductive intracellular gate.

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Primary Citation of related structures