8WDK image
Deposition Date 2023-09-15
Release Date 2024-09-18
Last Version Date 2024-10-16
Entry Detail
PDB ID:
8WDK
Keywords:
LIGASE
Title:
The complex structure of Cul2-VCB-Protac-Wee1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Insect cell expression vector pTIE1
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.64 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8WDK validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cullin-2
Gene (Uniprot):CUL2
Chain IDs:A
Chain Length:745
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q13617 Pfam ID:PF00888, PF10557 EC:2.3.2.32
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Elongin-B
Gene (Uniprot):ELOB
Chain IDs:D (auth: B)
Chain Length:104
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q15370 Pfam ID:PF00240
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Elongin-C
Gene (Uniprot):ELOC
Chain IDs:E (auth: C)
Chain Length:96
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q15369 Pfam ID:PF03931
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:E3 ubiquitin-protein ligase RBX1, N-terminally processed
Gene (Uniprot):RBX1
Chain IDs:B (auth: R)
Chain Length:82
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62877 Pfam ID:PF12678 EC:2.3.2.27
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:von Hippel-Lindau disease tumor suppressor
Gene (Uniprot):VHL
Chain IDs:C (auth: V)
Chain Length:155
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P40337 Pfam ID:PF01847, PF17211 EC:2.3.2.B13
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Wee1-like protein kinase
Gene (Uniprot):WEE1
Chain IDs:F (auth: W)
Chain Length:286
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P30291 Pfam ID:PF00069 EC:2.7.10.2
Ligand Molecules
W6U
Primary Citation
Structure of Cul2-VCB-Protac-Wee1 complex at 3.6 Angstrom resolution.
To Be Published ? ? ? (?)
Primary Citation of related structures
8WDK
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