8WA3 image
Entry Detail
PDB ID:
8WA3
EMDB ID:
Title:
Cryo-EM structure of peptide free and Gs-coupled GIPR
Biological Source:
PDB Version:
Deposition Date:
2023-09-06
Release Date:
2024-03-06
Method Details:
Experimental Method:
Resolution:
2.86 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(s) subunit alpha isoforms short
Mutations:S54N, G226A, E268A, N271K, K274D, R280K, T284D, I285T, A366S
Chain IDs:B (auth: A)
Chain Length:394
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1,O-antigen polymerase
Chain IDs:C (auth: B)
Chain Length:371
Number of Molecules:1
Biological Source:Rattus norvegicus, Leptolinea tardivitalis
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Chain IDs:D (auth: G)
Chain Length:71
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Description:Nanobody-35
Chain IDs:E (auth: N)
Chain Length:140
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Description:Gastric inhibitory polypeptide receptor,Fusion protein
Mutations:T345F
Chain IDs:A (auth: R)
Chain Length:573
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Molecular features of the ligand-free GLP-1R, GCGR and GIPR in complex with G s proteins.
Cell Discov 10 18 18 (2024)
PMID: 38346960 DOI: 10.1038/s41421-024-00649-0

Abstact

Class B1 G protein-coupled receptors (GPCRs) are important regulators of many physiological functions such as glucose homeostasis, which is mainly mediated by three peptide hormones, i.e., glucagon-like peptide-1 (GLP-1), glucagon (GCG), and glucose-dependent insulinotropic polypeptide (GIP). They trigger a cascade of signaling events leading to the formation of an active agonist-receptor-G protein complex. However, intracellular signal transducers can also activate the receptor independent of extracellular stimuli, suggesting an intrinsic role of G proteins in this process. Here, we report cryo-electron microscopy structures of the human GLP-1 receptor (GLP-1R), GCG receptor (GCGR), and GIP receptor (GIPR) in complex with Gs proteins without the presence of cognate ligands. These ligand-free complexes share a similar intracellular architecture to those bound by endogenous peptides, in which, the Gs protein alone directly opens the intracellular binding cavity and rewires the extracellular orthosteric pocket to stabilize the receptor in a state unseen before. While the peptide-binding site is partially occupied by the inward folded transmembrane helix 6 (TM6)-extracellular loop 3 (ECL3) juncture of GIPR or a segment of GCGR ECL2, the extracellular portion of GLP-1R adopts a conformation close to the active state. Our findings offer valuable insights into the distinct activation mechanisms of these three important receptors. It is possible that in the absence of a ligand, the intracellular half of transmembrane domain is mobilized with the help of Gs protein, which in turn rearranges the extracellular half to form a transitional conformation, facilitating the entry of the peptide N-terminus.

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