8W6Y image
Entry Detail
PDB ID:
8W6Y
Title:
Ferritin from Ureaplasma diversum soaking in Fe2+ solution for 10 min
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-08-30
Release Date:
2024-06-12
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
F 4 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ferritin
Chain IDs:A
Chain Length:181
Number of Molecules:1
Biological Source:Ureaplasma diversum
Ligand Molecules
Primary Citation
Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc. 146 11657 11668 (2024)
PMID: 38641862 DOI: 10.1021/jacs.3c13830

Abstact

All protein-directed syntheses of metal nanoclusters (NCs) and nanoparticles (NPs) have attracted considerable attention because protein scaffolds provide a unique metal coordination environment and can adjust the shape and morphology of NCs and NPs. However, the detailed formation mechanisms of NCs or NPs directed by protein templates remain unclear. In this study, by taking advantage of the ferritin nanocage as a biotemplate to monitor the growth of Fe-O NCs as a function of time, we synthesized a series of iron NCs with different sizes and shapes and subsequently solved their corresponding three-dimensional atomic-scale structures by X-ray protein crystallography and cryo-electron microscopy. The time-dependent structure analyses revealed the growth process of these Fe-O NCs with the 4-fold channel of ferritin as nucleation sites. To our knowledge, the newly biosynthesized Fe35O23Glu12 represents the largest Fe-O NCs with a definite atomic structure. This study contributes to our understanding of the formation mechanism of iron NCs and provides an effective method for metal NC synthesis.

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Primary Citation of related structures