8W0E image
Deposition Date 2024-02-13
Release Date 2024-10-02
Last Version Date 2024-12-25
Entry Detail
PDB ID:
8W0E
Keywords:
Title:
Cryo-EM structure of a human MCM2-7 single hexamer on dsDNA
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM2
Gene (Uniprot):MCM2
Chain IDs:A (auth: 2)
Chain Length:904
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM3
Gene (Uniprot):MCM3
Chain IDs:B (auth: 3)
Chain Length:810
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM4
Gene (Uniprot):MCM4
Chain IDs:C (auth: 4)
Chain Length:866
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM5
Gene (Uniprot):MCM5
Chain IDs:D (auth: 5)
Chain Length:734
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM6
Gene (Uniprot):MCM6
Chain IDs:E (auth: 6)
Chain Length:821
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA replication licensing factor MCM7
Gene (Uniprot):MCM7
Chain IDs:F (auth: 7)
Chain Length:719
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (25-MER)
Chain IDs:G (auth: O)
Chain Length:25
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (25-MER)
Chain IDs:H (auth: S)
Chain Length:25
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Primary Citation
Multiple mechanisms for licensing human replication origins.
Nature 636 488 498 (2024)
PMID: 39604729 DOI: 10.1038/s41586-024-08237-8

Abstact

Loading of replicative helicases is obligatory for the assembly of DNA replication machineries. The eukaryotic MCM2-7 replicative helicase motor is deposited onto DNA by the origin recognition complex (ORC) and co-loader proteins as a head-to-head double hexamer to license replication origins. Although extensively studied in budding yeast1-4, the mechanisms of origin licensing in multicellular eukaryotes remain poorly defined. Here we use biochemical reconstitution and electron microscopy to reconstruct the human MCM loading pathway. We find that unlike in yeast, the ORC6 subunit of the ORC is not essential for-but enhances-human MCM loading. Electron microscopy analyses identify several intermediates en route to MCM double hexamer formation in the presence and absence of ORC6, including a DNA-loaded, closed-ring MCM single hexamer intermediate that can mature into a head-to-head double hexamer through multiple mechanisms. ORC6 and ORC3 facilitate the recruitment of the ORC to the dimerization interface of the first hexamer into MCM-ORC (MO) complexes that are distinct from the yeast MO complex5,6 and may orient the ORC for second MCM hexamer loading. Additionally, MCM double hexamer formation can proceed through dimerization of independently loaded MCM single hexamers, promoted by a propensity of human MCM2-7 hexamers to self-dimerize. This flexibility in human MCM loading may provide resilience against cellular replication stress, and the reconstitution system will enable studies addressing outstanding questions regarding DNA replication initiation and replication-coupled events in the future.

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