8W00 image
Deposition Date 2024-02-13
Release Date 2024-04-03
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8W00
Title:
Q108K:K40L:T51V:T53S:Y19W:R58W:L117E mutant of hCRBPII bound to synthetic fluorophore TD-1V
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.23 Å
R-Value Free:
0.18
R-Value Work:
0.17
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Retinol-binding protein 2
Gene (Uniprot):RBP2
Mutations:Q108K:K40L:T51V:T53S:Y19W:R58W:L117E
Chain IDs:A, B
Chain Length:133
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Regulation of Absorption and Emission in a Protein/Fluorophore Complex.
Acs Chem.Biol. 19 1725 1732 (2024)
PMID: 39046136 DOI: 10.1021/acschembio.4c00125

Abstact

Human cellular retinol binding protein II (hCRBPII) was used as a protein engineering platform to rationally regulate absorptive and emissive properties of a covalently bound fluorogenic dye. We demonstrate the binding of a thio-dapoxyl analog via formation of a protonated imine between an active site lysine residue and the chromophore's aldehyde. Rational manipulation of the electrostatics of the binding pocket results in a 204 nm shift in absorption and a 131 nm shift in emission. The protein is readily expressed in mammalian systems and binds with exogenously delivered fluorophore as demonstrated by live-cell imaging experiments.

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Primary Citation of related structures